Explore Workflows
View already parsed workflows here or click here to add your own
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pipeline.cwl
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Path: CWLworkflow/pipeline.cwl Branch/Commit ID: master |
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STAR-RNA-Seq alignment and transcript/gene abundance workflow
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Path: definitions/pipelines/rnaseq_star_fusion.cwl Branch/Commit ID: master |
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Identifies non-coding RNAs using Rfams covariance models
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Path: workflows/cmsearch-multimodel-wf.cwl Branch/Commit ID: assembly |
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wf-svcall.cwl
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Path: wes-agha-test/wes_chr21_test-workflow-gcp/wf-svcall.cwl Branch/Commit ID: master |
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qiime2 demux paired sequences
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Path: packed/qiime2-step1-import-demux-paired.cwl Branch/Commit ID: qiime2-workflow-paired Packed ID: qiime2-02-demux-emp-paired.cwl |
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adapter for sequence_align_and_tag
Some workflow engines won't stage files in our nested structure, so parse it out here |
Path: definitions/subworkflows/sequence_align_and_tag_adapter.cwl Branch/Commit ID: low-vaf |
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DeriveArrayElementCoordinates
Derive array element coordinates in the simulation pipeline coordinate system. |
Path: workflows/DeriveArrayElementCoordinates.cwl Branch/Commit ID: main |
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chksum_for_a_corrupted_xam_file.cwl
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Path: cwls/chksum_for_a_corrupted_xam_file.cwl Branch/Commit ID: master |
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pipeline_cavatica.cwl
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Path: pipeline_cavatica.cwl Branch/Commit ID: main |
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sar_coherence_parallel_test.cwl#main
Parallel InSAR coherence workflow: 1. Generate InSAR pairs from input date range and burst parameters 2. Process each pair in parallel (scatter) 2. STAC results (removed for now) |
Path: cwl/sar_coherence_parallel_test.cwl Branch/Commit ID: coherence_parallel_refactor Packed ID: main |
