Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	bam2vcf.cwl	https://github.com/nigyta/rice_reseq.git Path: workflows/bam2vcf.cwl Branch/Commit ID: master
	BD Rhapsody™ WTA Analysis Pipeline The BD Rhapsody™ WTA Analysis Pipeline is used to create sequencing libraries from single cell transcriptomes without having to specify a targeted panel. After sequencing, the analysis pipeline takes the FASTQ files, a reference genome file and a transcriptome annotation file for gene alignment. The pipeline generates molecular counts per cell, read counts per cell, metrics, and an alignment file.	https://github.com/GeorgeAlehandro/cwl_1_11.git Path: workflow1_11.cwl Branch/Commit ID: main Packed ID: main
	scatter-valuefrom-wf4.cwl#main	https://github.com/common-workflow-language/cwl-v1.1.git Path: tests/scatter-valuefrom-wf4.cwl Branch/Commit ID: master Packed ID: main
	tt_blastn_wnode	https://github.com/ncbi/pgap.git Path: task_types/tt_blastn_wnode.cwl Branch/Commit ID: dev
	module-4.cwl	https://github.com/mskcc/access-pipeline.git Path: workflows/module-4.cwl Branch/Commit ID: master
	somatic_subpipeline.cwl	https://github.com/PMCC-BioinformaticsCore/janis-pipelines.git Path: janis_pipelines/wgs_somatic/cwl/tools/somatic_subpipeline.cwl Branch/Commit ID: master
	assembly.cwl	https://github.com/vetscience/Assemblosis.git Path: Run/assembly.cwl Branch/Commit ID: master
	bqsr-flow-distr.cwl Run BQSR pre+post+plot flow with distribution	https://github.com/sentieon/sentieon-cwl.git Path: stage/bqsr-flow-distr.cwl Branch/Commit ID: master
	Seed Protein Alignments	https://github.com/ncbi/pgap.git Path: protein_alignment/wf_seed_seqids.cwl Branch/Commit ID: master
	bwameth_mulitlib_start_with_trimmed.cwl	https://github.com/ifishlin/Benchmarking_CWL.git Path: workflows/bwameth/bwameth_mulitlib_start_with_trimmed.cwl Branch/Commit ID: main