Explore Workflows

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Graph	Name	Retrieved From	View
	hi-c-processing-parta-juicer.cwl	https://github.com/4dn-dcic/pipelines-cwl.git Path: cwl_awsem_v1/hi-c-processing-parta-juicer.cwl Branch/Commit ID: dev2
	wf_YW2CWL_parser.cwl	https://github.com/idaks/cwl_modeling.git Path: yw_cwl_modeling/yw2cwl_parser/example_sql/YW2CWL_parser/wf_YW2CWL_parser.cwl Branch/Commit ID: master
	Aseq pre-processing for the polyA pipeline This workflow does pre-processing of Aseq data for the polyA pipeline. (Citation needed) Sequencing data are converted to fasta, checked for valid 5'' and 3'' ends and reverse complemented. Steps are: - gnu_zip fastq - fastq_to_fasta - rs-filter-by-5p-adapter.keep5pAdapter.pl - cutadapt - fastx_reverse_complement - gzip	https://github.com/ninsch3000/CWL_test_pAp.git Path: workflows/cjh_polyA_prepro_WF1.1.cwl Branch/Commit ID: master
	tRNA_selection.cwl	https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git Path: tools/tRNA_selection.cwl Branch/Commit ID: 43d2fb8
	schemadef-wf.cwl	https://github.com/common-workflow-language/common-workflow-language.git Path: v1.0/v1.0/schemadef-wf.cwl Branch/Commit ID: master
	EMG assembly for paired end Illumina	https://github.com/mr-c/ebi-metagenomics-cwl.git Path: workflows/emg-pipeline-v4-assembly-metaSPAdes.cwl Branch/Commit ID: viz
	wf-svcall.cwl	https://github.com/bcbio/bcbio_validation_workflows.git Path: wes-agha-test/wes_chr21_test-workflow-gcp/wf-svcall.cwl Branch/Commit ID: master
	mirna_profiling.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/mirnaseq/mirna_profiling.cwl Branch/Commit ID: master
	Detect Variants workflow	https://github.com/genome/cancer-genomics-workflow.git Path: detect_variants/detect_variants.cwl Branch/Commit ID: toil_compatibility
	gdc workflow	https://github.com/griffithlab/regtools-cwl.git Path: gdc_client/workflow.cwl Branch/Commit ID: master