Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	wf_input_norm_and_entropy.cwl This workflow normalizes clip aligned reads against a size-matched input sample. Then, an entropy score is calculated for each peak found.	https://github.com/YeoLab/merge_peaks.git Path: cwl/wf_input_norm_and_entropy.cwl Branch/Commit ID: master
	workflow_simple.cwl	https://github.com/fstrozzi/scalability-reproducibility-chapter.git Path: CWL/workflow_simple.cwl Branch/Commit ID: master
	metrics.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/dnaseq/metrics.cwl Branch/Commit ID: 1.0
	wf-loadContents4.cwl	https://github.com/common-workflow-language/cwl-v1.1.git Path: tests/wf-loadContents4.cwl Branch/Commit ID: master
	indexing_bed	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/cwl/subworkflows/indexing_bed.cwl Branch/Commit ID: 1.1.3
	predictions.cwl	https://github.com/simleo/workflow-run-crate.git Path: docs/examples/draft/ml-predict-pipeline-streamflow/predictions.cwl Branch/Commit ID: main
	any-type-compat.cwl	https://github.com/common-workflow-language/cwl-v1.2.git Path: tests/any-type-compat.cwl Branch/Commit ID: main
	strelka workflow	https://github.com/apaul7/cancer-genomics-workflow.git Path: definitions/subworkflows/strelka_and_post_processing.cwl Branch/Commit ID: low-vaf
	find_hotspots_in_normals.cwl Workflow to find hotspot VAFs from duplex (for Tumor sample) and unfiltered (for Normal sample) pileups. These inputs are all required to be sorted in the same order: sample_ids patient_ids sample_classes unfiltered_pileups duplex_pileups	https://github.com/andurill/ACCESS-Pipeline.git Path: workflows/subworkflows/find_hotspots_in_normals.cwl Branch/Commit ID: master
	exomeseq-gatk4-preprocessing/v2.0.3 Whole Exome Sequence preprocessing using GATK4 - v2.0.3	https://github.com/bespin-workflows/exomeseq-gatk4.git Path: exomeseq-gatk4-preprocessing.cwl Branch/Commit ID: v2.0.3