Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Production Top-level workflow	https://gitlab.cta-observatory.org/cta-computing/dpps/dpps-workflows.git Path: dpps.cwl Branch/Commit ID: autoupdated
	workflow.cwl	https://github.com/FarahZKhan/scalability-reproducibility-chapter.git Path: CWL/workflow.cwl Branch/Commit ID: ProvCaptureDemo
	downsample unaligned BAM and align	https://github.com/genome/cancer-genomics-workflow.git Path: unaligned_bam_to_bqsr/downsample_workflow.cwl Branch/Commit ID: toil_compatibility
	EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.	https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git Path: workflows/emg-qc-paired.cwl Branch/Commit ID: 1b0851e
	SSU-from-tablehits.cwl	https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git Path: tools/SSU-from-tablehits.cwl Branch/Commit ID: 708fd97
	gatk-4.0.0.0-joint-calling.cwl	https://github.com/wtsi-hgi/arvados-pipelines.git Path: cwl/workflows/gatk-4.0.0.0-joint-calling.cwl Branch/Commit ID: master
	Bacterial Annotation, structural annotation, functional annotation: ab initio GeneMark, by WP, by HMM (second pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_2nd_pass.cwl Branch/Commit ID: dev
	CNV_pipeline	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/cwl/workflow.cwl Branch/Commit ID: 1.0.7
	main.cwl	https://github.com/alpha-unito/streamflow-fl.git Path: cwl/main.cwl Branch/Commit ID: master
	Single-cell RNA-Seq Aggregate Single-cell RNA-Seq Aggregate Aggregates gene expression data from multiple Single-cell RNA-Seq Alignment experiments.	https://github.com/Barski-lab/sc-seq-analysis.git Path: workflows/sc-rna-aggregate-wf.cwl Branch/Commit ID: main