Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph hi-c-processing-parta-juicer.cwl

https://github.com/4dn-dcic/pipelines-cwl.git

Path: cwl_awsem_v1/hi-c-processing-parta-juicer.cwl

Branch/Commit ID: dev2

workflow graph wf_YW2CWL_parser.cwl

https://github.com/idaks/cwl_modeling.git

Path: yw_cwl_modeling/yw2cwl_parser/example_sql/YW2CWL_parser/wf_YW2CWL_parser.cwl

Branch/Commit ID: master

workflow graph Aseq pre-processing for the polyA pipeline

This workflow does pre-processing of Aseq data for the polyA pipeline. (*Citation needed*) Sequencing data are converted to fasta, checked for valid 5'' and 3'' ends and reverse complemented. Steps are: - gnu_zip fastq - fastq_to_fasta - rs-filter-by-5p-adapter.keep5pAdapter.pl - cutadapt - fastx_reverse_complement - gzip

https://github.com/ninsch3000/CWL_test_pAp.git

Path: workflows/cjh_polyA_prepro_WF1.1.cwl

Branch/Commit ID: master

workflow graph tRNA_selection.cwl

https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git

Path: tools/tRNA_selection.cwl

Branch/Commit ID: 43d2fb8

workflow graph schemadef-wf.cwl

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/schemadef-wf.cwl

Branch/Commit ID: master

workflow graph EMG assembly for paired end Illumina

https://github.com/mr-c/ebi-metagenomics-cwl.git

Path: workflows/emg-pipeline-v4-assembly-metaSPAdes.cwl

Branch/Commit ID: viz

workflow graph wf-svcall.cwl

https://github.com/bcbio/bcbio_validation_workflows.git

Path: wes-agha-test/wes_chr21_test-workflow-gcp/wf-svcall.cwl

Branch/Commit ID: master

workflow graph mirna_profiling.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/mirnaseq/mirna_profiling.cwl

Branch/Commit ID: master

workflow graph Detect Variants workflow

https://github.com/genome/cancer-genomics-workflow.git

Path: detect_variants/detect_variants.cwl

Branch/Commit ID: toil_compatibility

workflow graph gdc workflow

https://github.com/griffithlab/regtools-cwl.git

Path: gdc_client/workflow.cwl

Branch/Commit ID: master