Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	wf_trim_partial_and_map_se.cwl This workflow takes in appropriate trimming params and demultiplexed reads, and performs the following steps in order: trimx1, trimx2, fastq-sort, filter repeat elements, fastq-sort, genomic mapping, sort alignment, index alignment, namesort, PCR dedup, sort alignment, index alignment	https://github.com/YeoLab/eclip.git Path: cwl/wf_trim_partial_and_map_se.cwl Branch/Commit ID: master
	1st-workflow.cwl	https://github.com/golharam/cwl-graph-generate.git Path: test/1st-workflow.cwl Branch/Commit ID: master
	dedup-2-pass.cwl run 2-pass dedup: algo LocusCollector + algo Dedup sequentially	https://github.com/sentieon/sentieon-cwl.git Path: stage/dedup-2-pass.cwl Branch/Commit ID: master
	kf-cram2gvcf-bam-input.cwl	https://github.com/cr-ste-justine/chujs-alignment-workflow.git Path: workflows/kf-cram2gvcf-bam-input.cwl Branch/Commit ID: dev
	helloworld-nested.cwl	https://github.com/audrium/reana-demo-scattered-helloworld.git Path: workflow/cwl/helloworld-nested.cwl Branch/Commit ID: master
	EMG assembly for paired end Illumina	https://github.com/farahzkhan/ebi-metagenomics-cwl.git Path: workflows/emg-assembly.cwl Branch/Commit ID: master
	samtools_view_sam2bam	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/cwl/subworkflows/samtools_view_sam2bam.cwl Branch/Commit ID: 1.0.7
	scatter-wf4.cwl#main	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/scatter-wf4.cwl Branch/Commit ID: main Packed ID: main
	5S-from-tablehits.cwl	https://github.com/farahzkhan/ebi-metagenomics-cwl.git Path: tools/5S-from-tablehits.cwl Branch/Commit ID: master
	repliseq-parta.cwl	https://github.com/mr-c/4dn-dcic-pipelines-cwl.git Path: cwl_awsem_v1/repliseq/repliseq-parta.cwl Branch/Commit ID: master