Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	EMG assembly for paired end Illumina	https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git Path: workflows/emg-pipeline-v4-assembly-metaSPAdes.cwl Branch/Commit ID: master
	bam-bedgraph-bigwig.cwl	https://github.com/barski-lab/ga4gh_challenge.git Path: subworkflows/bam-bedgraph-bigwig.cwl Branch/Commit ID: master
	Detect Variants workflow for WGS pipeline	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/detect_variants_wgs.cwl Branch/Commit ID: master
	steps.cwl	https://github.com/DimitraPanou/scRNAseq-cwl.git Path: steps.cwl Branch/Commit ID: master
	qc_workflow.cwl	https://github.com/andurill/ACCESS-Pipeline.git Path: workflows/QC/qc_workflow.cwl Branch/Commit ID: 0.0.33_dmp
	conflict-wf.cwl#collision	https://github.com/common-workflow-language/cwl-v1.2.git Path: tests/conflict-wf.cwl Branch/Commit ID: main Packed ID: collision
	workflow_simple.cwl	https://github.com/fstrozzi/scalability-reproducibility-chapter.git Path: CWL/workflow_simple.cwl Branch/Commit ID: master
	Detect Variants workflow for nonhuman WGS pipeline	https://github.com/apaul7/cancer-genomics-workflow.git Path: definitions/pipelines/detect_variants_wgs_nonhuman.cwl Branch/Commit ID: low-vaf
	samtools_mpileup_subpipeline.cwl	https://github.com/PMCC-BioinformaticsCore/janis-pipelines.git Path: janis_pipelines/wgs_somatic/cwl/tools/samtools_mpileup_subpipeline.cwl Branch/Commit ID: master
	preprocess_vcf.cwl This workflow will perform preprocessing steps on VCFs for the OxoG/Variantbam/Annotation workflow.	https://github.com/ICGC-TCGA-PanCancer/pcawg-minibam.git Path: preprocess_vcf.cwl Branch/Commit ID: 1.0.0