Explore Workflows

https://github.com/andurill/ACCESS-Pipeline.git

Path: workflows/subworkflows/snps_and_indels.cwl

Branch/Commit ID: master

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/emg-pipeline-v3-paired.cwl

Branch/Commit ID: 5dc7c5c

https://github.com/YeoLab/eclip.git

Path: cwl/wf_get_peaks_se.cwl

Branch/Commit ID: master

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/count-lines6-wf.cwl

Branch/Commit ID: main

This workflow compares two groups of sequences by running two steps: \n 1. a MSA aligment to calculate a distance matrix \n 2. generate and plot a phylogenetic tree annotated by group labels \n \n For more information please see: \n https://w3id.org/cwl/view/git/5227e2c45be641c6675c0a24a8b1f72d712fac40/CWL/workflows/msa_group_compare.cwl

https://github.com/CompEpigen/msa_group_compare.git

Path: CWL/workflows/msa_group_compare.cwl

Branch/Commit ID: master

https://github.com/bespin-workflows/exomeseq-gatk4.git

Path: subworkflows/exomeseq-gatk4-02-variantdiscovery.cwl

Branch/Commit ID: develop

https://github.com/EOSC-LOFAR/presto-cwl.git

Path: presto_nosort.cwl

Branch/Commit ID: visualise

https://github.com/hubmapconsortium/azimuth-annotate.git

Path: pipeline.cwl

Branch/Commit ID: 2e4017d

https://github.com/pvanheus/lukasa.git

Path: protein_evidence_mapping.cwl

Branch/Commit ID: main

This workflow will perform OxoG filtering on a set of VCFs. It will produce VCFs and their associated index files.

https://github.com/ICGC-TCGA-PanCancer/pcawg-oxog-filter.git

Path: pcawg_oxog_wf.cwl

Branch/Commit ID: master