Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	zip_and_index_vcf.cwl This is a very simple workflow of two steps. It will zip an input VCF file and then index it. The zipped file and the index file will be in the workflow output.	https://github.com/svonworl/OxoG-Dockstore-Tools.git Path: zip_and_index_vcf.cwl Branch/Commit ID: develop
	facets	https://github.com/mskcc/roslin-variant.git Path: setup/cwl/facets.cwl Branch/Commit ID: 2.4.x
	transcriptome_annotation.cwl	https://github.com/ncbi/cloud-transcriptome-annotation.git Path: bin/cwl-ngs-workflows-cbb/workflows/Annotation/transcriptome_annotation.cwl Branch/Commit ID: master
	default-dir5.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/default-dir5.cwl Branch/Commit ID: main
	preprocess-illumina.cwl	https://github.com/fjrmoreews/cwl-workflow-SARS-CoV-2.git Path: PreProcessing/preprocess-illumina.cwl Branch/Commit ID: master
	WES GATK4 Whole Exome Sequence analysis GATK4 Preprocessing	https://github.com/Duke-GCB/bespin-cwl.git Path: workflows/exomeseq-gatk4.cwl Branch/Commit ID: master
	collapsed_fastq_to_bam.cwl	https://github.com/mskcc/ACCESS-Pipeline.git Path: workflows/marianas/collapsed_fastq_to_bam.cwl Branch/Commit ID: master
	mut2.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/mut2.cwl Branch/Commit ID: main
	CompPASS-Plus_workflow.cwl	https://github.com/adamscharlotte/CWL-workflow.git Path: CompPASS-Plus_workflow.cwl Branch/Commit ID: master
	gk-full-step-qeheat.cwl	https://github.com/vdikan/cwl-gk-thermal.git Path: cwl/gk-full-step-qeheat.cwl Branch/Commit ID: master