Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Find reads with predicted coding sequences above 60 AA in length

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/orf_prediction.cwl

Branch/Commit ID: f6b5196
workflow graph RNA-Seq alignment and transcript/gene abundance workflow

https://github.com/genome/cancer-genomics-workflow.git

Path: rnaseq/workflow.cwl

Branch/Commit ID: toil_compatibility
workflow graph try_wf1.cwl

https://github.com/idaks/cwl_modeling.git

Path: yw_cwl_modeling/manual_paleocar_cwl_model/try_wf1.cwl

Branch/Commit ID: master
workflow graph prok-annotation-cheetah.cwl

https://github.com/mr-c/GALES.git

Path: cwl/workflows/prok-annotation-cheetah.cwl

Branch/Commit ID: upgrade-test
workflow graph A CGP workflow to generate checksum of an interleaved fastq

A workflow to generate checksums of FastQ files and a interleaved FastQ from them. See the [workflow-seq-import](https://github.com/cancerit/workflow-seq-import) website for more information.

https://github.com/cancerit/workflow-seq-import.git

Path: cwls/chksum_seqval_wf_interleaved_fq.cwl

Branch/Commit ID: 0.4.0
workflow graph limit_detection.cwl

https://github.com/andersgs/cwl_flows.git

Path: limit_detection/limit_detection.cwl

Branch/Commit ID: master
workflow graph gunzip-workflow.cwl

https://github.com/NAL-i5K/CWL_Common-Workflow-Language.git

Path: demo_workflow4/gunzip-workflow.cwl

Branch/Commit ID: dev
workflow graph repliseq-parta.cwl

https://github.com/mr-c/4dn-dcic-pipelines-cwl.git

Path: cwl_awsem_v1/repliseq/repliseq-parta.cwl

Branch/Commit ID: master
workflow graph kfdrc_cram_to_gvcf.cwl

https://github.com/cr-ste-justine/chujs-alignment-workflow.git

Path: workflows/kfdrc_cram_to_gvcf.cwl

Branch/Commit ID: dev
workflow graph WGS and MT analysis for fastq files

rna / protein - qc, preprocess, filter, annotation, index, abundance

 https://github.com/MG-RAST/pipeline.git

Path: CWL/Workflows/wgs-noscreen-fasta.workflow.cwl

Branch/Commit ID: master