Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	pdf2wordcloud.cwl	https://github.com/wilke/CWL-Quick-Start.git Path: CWL/Workflows/pdf2wordcloud.cwl Branch/Commit ID: master
	samtools_mpileup_subpipeline.cwl	https://github.com/PMCC-BioinformaticsCore/janis-pipelines.git Path: janis_pipelines/wgs_somatic/cwl/tools/samtools_mpileup_subpipeline.cwl Branch/Commit ID: master
	SSU-from-tablehits.cwl	https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git Path: tools/SSU-from-tablehits.cwl Branch/Commit ID: 5dc7c5c
	rRNA_selection.cwl	https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git Path: tools/rRNA_selection.cwl Branch/Commit ID: 56dafa4
	wf_trim_and_map_pe.cwl This workflow takes in appropriate trimming params and demultiplexed reads, and performs the following steps in order: trimx1, trimx2, fastq-sort, filter repeat elements, fastq-sort, genomic mapping, sort alignment, index alignment, namesort, PCR dedup, sort alignment, index alignment	https://github.com/YeoLab/eclip.git Path: cwl/wf_trim_and_map_pe.cwl Branch/Commit ID: master
	5fb4c1087a8d46e7885c74e0e3d79d90.cwl	https://renkulab.io/gitlab/team-renku/zurich-bikes-analysis.git Path: .renku/workflow/5fb4c1087a8d46e7885c74e0e3d79d90.cwl Branch/Commit ID: master
	star-cufflinks_wf_pe.cwl	https://github.com/pitagora-network/pitagora-cwl.git Path: workflows/star-cufflinks/paired_end/star-cufflinks_wf_pe.cwl Branch/Commit ID: master
	tophat2-cufflinks_wf_pe.cwl	https://github.com/pitagora-network/pitagora-cwl.git Path: workflows/tophat2-cufflinks/paired_end/tophat2-cufflinks_wf_pe.cwl Branch/Commit ID: master
	filtering.cwl	https://github.com/mskcc/roslin-variant.git Path: setup/cwl/filtering.cwl Branch/Commit ID: dev
	rw-flow.cwl run multiple rw stages sequentially using earlier step output as later stage input_bam	https://github.com/Sentieon/Sentieon-cwl.git Path: stage/rw-flow.cwl Branch/Commit ID: master