Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	RNASelector as a CWL workflow https://doi.org/10.1007/s12275-011-1213-z	https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git Path: workflows/rna-selector.cwl Branch/Commit ID: ca6ca613
	EMG pipeline v3.0 (paired end version)	https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git Path: workflows/emg-pipeline-v3-paired.cwl Branch/Commit ID: 2104dc3
	cnv_gridss CNV GRIDSS calling	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/subworkflows/cnv_gridss.cwl Branch/Commit ID: 3bb03c9b
	Salmon quantification, FASTQ -> H5AD count matrix	https://github.com/hubmapconsortium/multiome-rna-atac-pipeline.git Path: salmon-rnaseq/steps/salmon-quantification.cwl Branch/Commit ID: 68e0cc1
	record-output-wf.cwl	https://github.com/common-workflow-language/cwl-v1.1.git Path: tests/record-output-wf.cwl Branch/Commit ID: main
	functional analysis prediction with InterProScan	https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git Path: workflows/functional_analysis.cwl Branch/Commit ID: 8515542
	preprocess_vcf.cwl This workflow will perform preprocessing steps on VCFs for the OxoG/Variantbam/Annotation workflow.	https://github.com/icgc-tcga-pancancer/pcawg-snv-indel-annotation.git Path: preprocess_vcf.cwl Branch/Commit ID: develop
	CNV_pipeline	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/cwl/workflow.cwl Branch/Commit ID: 1.1.3
	count-lines11-null-step-wf-noET.cwl	https://github.com/common-workflow-language/common-workflow-language.git Path: v1.0/v1.0/count-lines11-null-step-wf-noET.cwl Branch/Commit ID: master
	phase VCF	https://github.com/fgomez02/analysis-workflows.git Path: definitions/subworkflows/phase_vcf.cwl Branch/Commit ID: No_filters_detect_variants