Explore Workflows

VDJ_GatherCalls collect the outputs from the multi-processed VDJ step into one file.

https://github.com/Chi-CRL/cwl_check_workflow.git

Path: rhapsody_pipeline_2.0.cwl

Branch/Commit ID: main

Packed ID: VDJ_GatherCalls.cwl

Alpha rarefaction plotting from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/

https://github.com/Duke-GCB/bespin-cwl.git

Path: packed/qiime2-step3-alpha-analysis.cwl

Branch/Commit ID: qiime2-workflow

Packed ID: qiime2-07-alpha-rarefaction.cwl

https://github.com/mr-c/4dn-dcic-pipelines-cwl.git

Path: cwl_awsem_v1/hi-c-processing-bam.cwl

Branch/Commit ID: dev2

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/env-wf1.cwl

Branch/Commit ID: master

https://github.com/vdikan/cwl-gk-thermal.git

Path: cwl/gk--store-xvs-row.cwl

Branch/Commit ID: master

Obtaining and importing data from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/

https://github.com/bespin-workflows/16s-qiime2.git

Path: subworkflows/qiime2-01-import-data-paired.cwl

Branch/Commit ID: develop

https://github.com/proteinswebteam/ebi-metagenomics-cwl.git

Path: tools/tRNA_selection.cwl

Branch/Commit ID: caea457

https://github.com/Epigenomics-Screw/Screw.git

Path: cwl/preprocess.cwl

Branch/Commit ID: dev

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/output-arrays-file-wf.cwl

Branch/Commit ID: master

This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow!

https://github.com/david4096/oxog-dockstore-tools.git

Path: minibam_sub_wf.cwl

Branch/Commit ID: develop