Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
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kallisto_wf_pe.cwl
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https://github.com/pitagora-network/pitagora-cwl.git
Path: workflows/kallisto/paired_end/kallisto_wf_pe.cwl Branch/Commit ID: master |
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qa_check_subwf.cwl
This subworkflow will perform a QA check on the OxoG outputs. It will perform the QA check on a single tumour and it associated VCFs |
https://github.com/ICGC-TCGA-PanCancer/OxoG-Dockstore-Tools.git
Path: qa_check_subwf.cwl Branch/Commit ID: master |
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ocrevaluation-performance-test-files-wf-pack.cwl#ocrevaluation-performance-wf.cwl
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https://github.com/KBNLresearch/ochre.git
Path: ochre/cwl/ocrevaluation-performance-test-files-wf-pack.cwl Branch/Commit ID: master Packed ID: ocrevaluation-performance-wf.cwl |
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count-lines9-wf-noET.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/count-lines9-wf-noET.cwl Branch/Commit ID: master |
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oxog_sub_wf.cwl
This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow! |
https://github.com/svonworl/oxog-dockstore-tools.git
Path: oxog_sub_wf.cwl Branch/Commit ID: master |
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kallisto_wf_se.cwl
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https://github.com/pitagora-network/pitagora-cwl.git
Path: workflows/kallisto/single_end/kallisto_wf_se.cwl Branch/Commit ID: master |
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exome alignment and somatic variant detection for cle purpose
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https://github.com/tmooney/cancer-genomics-workflow.git
Path: definitions/pipelines/somatic_exome_cle.cwl Branch/Commit ID: downsample_and_recall |
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Transcriptome assembly workflow (single-end version)
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https://github.com/EBI-Metagenomics/workflow-is-cwl.git
Path: workflows/TranscriptomeAssembly-wf.single-end.cwl Branch/Commit ID: master |
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SSU-from-tablehits.cwl
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https://github.com/farahzkhan/ebi-metagenomics-cwl.git
Path: tools/SSU-from-tablehits.cwl Branch/Commit ID: master |
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cram-get-fasta.cwl
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https://github.com/wtsi-hgi/arvados-pipelines.git
Path: cwl/workflows/cram-get-fasta.cwl Branch/Commit ID: master |