Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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examplePipeline.cwl
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https://github.com/InsightSoftwareConsortium/GetYourBrainStraight.git
Path: HCK01_2022_Virtual/Tutorials/GetYourBrainPipelined/CWL-Demo/examplePipeline.cwl Branch/Commit ID: main |
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RNASelector as a CWL workflow
https://doi.org/10.1007/s12275-011-1213-z |
https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/rna-selector.cwl Branch/Commit ID: c1f8b22 |
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PGAP Pipeline
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https://github.com/slottad/pgap.git
Path: wf_pgap.cwl Branch/Commit ID: master |
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Functional analyis of sequences that match the 16S SSU
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https://github.com/farahzkhan/ebi-metagenomics-cwl.git
Path: workflows/16S_taxonomic_analysis.cwl Branch/Commit ID: master |
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filter_alignment_artifacts.cwl
GATK4.1.2 Alignment artifacts filtration workflow |
https://github.com/nci-gdc/gatk4_mutect2_cwl.git
Path: subworkflows/filter_alignment_artifacts.cwl Branch/Commit ID: master |
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annotator_sub_wf.cwl
This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow! |
https://github.com/svonworl/OxoG-Dockstore-Tools.git
Path: annotator_sub_wf.cwl Branch/Commit ID: master |
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bwa_index
Modified from https://github.com/kids-first/kf-somatic-workflow/blob/master/sub_workflows/prepare_reference.cwl |
https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/cwl/subworkflows/bwa_index.cwl Branch/Commit ID: 1.0.9 |
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count-lines2-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/count-lines2-wf.cwl Branch/Commit ID: main |
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canine_strelka2_module.cwl
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https://github.com/d3b-center/canine-dev.git
Path: subworkflows/canine_strelka2_module.cwl Branch/Commit ID: master |
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platanusB-w-rRNA.cwl
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https://github.com/nigyta/bact_genome.git
Path: cwl/workflow/platanusB-w-rRNA.cwl Branch/Commit ID: master |
