Workflow: Sort and merge input bed file and generate a .sorted.merged.bed file
Fetched 2025-07-01 08:57:43 GMT
Verified with cwltool version 3.1.20221201130942
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Unknown workflow license, check
source repository.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| bed_file | File | input bed file | |
| output_fn | String (Optional) | output sorted and merged bed file |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| sort |
sort.cwl
(CommandLineTool)
|
Sort input bed file | |
| merge |
merge.cwl
(CommandLineTool)
|
Merge input files which have been sorted |
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| merged_bed | File |
Permalink:
https://w3id.org/cwl/view/git/14be112d65ebb76f0368747099b5778f35d0387f/sort_merge.cwl
