Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph CODEX analysis pipeline using Cytokit

https://github.com/hubmapconsortium/codex-pipeline.git

Path: pipeline.cwl

Branch/Commit ID: a04e55b
workflow graph wf_bam_to_bigwig.cwl

https://github.com/YeoLab/sailor.git

Path: cwl/wf_bam_to_bigwig.cwl

Branch/Commit ID: master
workflow graph if_input_is_bz2_generate_md5sum_else_return_input_chksum_json.cwl

https://github.com/cancerit/workflow-seq-import.git

Path: cwls/toolkit/if_input_is_bz2_generate_md5sum_else_return_input_chksum_json.cwl

Branch/Commit ID: 0.3.2
workflow graph hello_world.cwl

https://github.com/Richard-Hansen/hello_world.git

Path: hello_world.cwl

Branch/Commit ID: v1.0.0
workflow graph hc-distr.cwl

https://github.com/Sentieon/Sentieon-cwl.git

Path: stage/hc-distr.cwl

Branch/Commit ID: master
workflow graph preprocess.cwl

https://github.com/epigenomics-screw/screw.git

Path: cwl/preprocess.cwl

Branch/Commit ID: master
workflow graph Example of setting up a simulation system

Common Workflow Language example that illustrate the process of setting up a simulation system containing a protein, step by step, using the BioExcel Building Blocks library (biobb). The particular example used is the Lysozyme protein (PDB code 1AKI).

https://github.com/stain/biobb_example_workflow.git

Path: protein_md.cwl

Branch/Commit ID: master
workflow graph Varscan Workflow

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/subworkflows/varscan_germline.cwl

Branch/Commit ID: low-vaf
workflow graph count-lines5-wf.cwl

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/count-lines5-wf.cwl

Branch/Commit ID: master
workflow graph multi-psf.cwl

https://github.com/gijzelaerr/spiel.git

Path: multi-psf.cwl

Branch/Commit ID: master