Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph gcaccess_from_list

https://github.com/ncbi/pgap.git

Path: task_types/tt_gcaccess_from_list.cwl

Branch/Commit ID: ce433f771ebf5677c9f40858e2ae91b1a7e75d30
workflow graph wf-alignment.cwl

https://github.com/bcbio/bcbio_validation_workflows.git

Path: wes-agha-test/wes_chr21_test-workflow-gcp/wf-alignment.cwl

Branch/Commit ID: master
workflow graph topmed-alignment.cwl

https://github.com/stain/topmed-workflows.git

Path: aligner/sbg-alignment-cwl/topmed-alignment.cwl

Branch/Commit ID: namespaces
workflow graph LSU-from-tablehits.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/LSU-from-tablehits.cwl

Branch/Commit ID: f914942
workflow graph EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/emg-qc-paired.cwl

Branch/Commit ID: master
workflow graph intersect_intervals.cwl

https://github.com/wtsi-hgi/arvados-pipelines.git

Path: cwl/workflows/intersect_intervals.cwl

Branch/Commit ID: master
workflow graph bams2gvcf.wBQSR.cwl

https://github.com/ddbj/human-reseq.git

Path: Workflows/bams2gvcf.wBQSR.cwl

Branch/Commit ID: master
workflow graph bams2gvcf.woBQSR_female_chrX_wXTR.multisapmles.cwl

https://github.com/ddbj/human-reseq.git

Path: Workflows/bams2gvcf.woBQSR_female_chrX_wXTR.multisapmles.cwl

Branch/Commit ID: master
workflow graph Task2

For CMRxRecon validation

https://github.com/CmrxRecon/CMRxRecon2024-snippets.git

Path: workflow-task2.cwl

Branch/Commit ID: master
workflow graph mutect parallel workflow

https://github.com/mnneveau/cancer-genomics-workflow.git

Path: mutect/workflow.cwl

Branch/Commit ID: master