Explore Workflows

First computes average per UniProt domain instance and then aligns all the average structures against core average structure. Outputs the alignment results along with the structures passing and failing the threshold for given Kpax score.

https://gitlab.inria.fr/capsid.public_codes/CroMaSt.git

Path: Tools/unmapped_unp_avg_align.cwl

Branch/Commit ID: main

Validate readout (if applicable for high and low gain chain).

https://github.com/gammasim/workflows.git

Path: workflows/ValidateReadout.cwl

Branch/Commit ID: main

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/pvacseq.cwl

Branch/Commit ID: master

https://github.com/cancerit/workflow-seq-import.git

Path: cwls/chksum_xam_to_interleaved_fq.cwl

Branch/Commit ID: 0.4.1

https://github.com/jeizenga/cwl-intro-gui-workshop.git

Path: 2018_matsue_biohackathon/vg_basic_workflow.cwl

Branch/Commit ID: master

network-guided gene prioritization method implementation by KnowEnG that ranks gene measurements by their correlation to observed phenotypes

https://github.com/KnowEnG/cwl-gene-prioritization.git

Path: Dockstore.cwl

Branch/Commit ID: master

Restore the contig names using the map file

https://github.com/EBI-Metagenomics/emg-viral-pipeline.git

Path: cwl/src/Tools/FastaRename/fasta_restore_swf.cwl

Branch/Commit ID: master

Set FADC pulse for high and low-gain channel. Apply transformations required by the simulation model (e.g., normalization, time shift)

https://github.com/gammasim/workflows.git

Path: workflows/SetReadoutPulseShape.cwl

Branch/Commit ID: main

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/stdout-wf_v1_0.cwl

Branch/Commit ID: main

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/emg-pipeline-v3-paired.cwl

Branch/Commit ID: 8515542