Explore Workflows
View already parsed workflows here or click here to add your own
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EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.
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Path: workflows/emg-qc-single.cwl Branch/Commit ID: master |
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revsort.cwl
Reverse the lines in a document, then sort those lines. |
Path: tests/revsort.cwl Branch/Commit ID: main |
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qiime2 explore sample taxonomic composition
Taxonomic analysis from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/ |
Path: packed/qiime2-step2-dada2-paired.cwl Branch/Commit ID: qiime2-workflow-paired Packed ID: qiime2-08-taxonomic-analysis.cwl |
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fillout_post_processing.cwl
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Path: cwl/fillout_post_processing.cwl Branch/Commit ID: master |
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adapter for sequence_align_and_tag
Some workflow engines won't stage files in our nested structure, so parse it out here |
Path: definitions/subworkflows/sequence_align_and_tag_adapter.cwl Branch/Commit ID: master |
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broad-best-practice-data-pre-processing-workflow-4-1-0-0_decomposed.cwl
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Path: broad-best-practice-data-pre-processing-workflow-4-1-0-0_decomposed.cwl Branch/Commit ID: 0.3 |
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EMG assembly for paired end Illumina
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Path: workflows/emg-assembly.cwl Branch/Commit ID: f993cad |
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bact_get_kmer_reference
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Path: task_types/tt_bact_get_kmer_reference.cwl Branch/Commit ID: master |
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gp_makeblastdb
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Path: progs/gp_makeblastdb.cwl Branch/Commit ID: master |
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Identifies non-coding RNAs using Rfams covariance models
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Path: workflows/subworkflows/cmsearch-condition.cwl Branch/Commit ID: master |
