Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Hello World Outputs a message using echo	https://github.com/YangYang-Lcos/legacy.git Path: workflows/hello/hello-param.cwl Branch/Commit ID: master
	qc_workflow_wo_waltz.cwl This workflow is intended to be used to test the QC module, without having to run the long waltz step	https://github.com/andurill/ACCESS-Pipeline.git Path: workflows/QC/qc_workflow_wo_waltz.cwl Branch/Commit ID: master
	exome alignment and somatic variant detection	https://github.com/tmooney/cancer-genomics-workflow.git Path: definitions/pipelines/somatic_exome_mouse.cwl Branch/Commit ID: downsample_and_recall
	checker-workflow-wrapping-tool.cwl This demonstrates how to wrap a \"real\" tool with a checker workflow that runs both the tool and a tool that performs verification of results	https://github.com/dockstore-testing/md5sum-checker.git Path: checker-workflow-wrapping-tool.cwl Branch/Commit ID: master
	Bacterial Annotation, ab initio (first pass) searched against AntiFam	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_ab_initio_antifam.cwl Branch/Commit ID: dev
	create_fig.cwl	https://github.com/jniestroy/cwl_parser.git Path: workflows/create_fig.cwl Branch/Commit ID: master
	bam to trimmed fastqs and biscuit alignments	https://github.com/fgomez02/analysis-workflows.git Path: definitions/subworkflows/bam_to_trimmed_fastq_and_biscuit_alignments.cwl Branch/Commit ID: No_filters_detect_variants
	tt_kmer_compare_wnode Pairwise comparison	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_compare_wnode.cwl Branch/Commit ID: dev
	docker_VisIVO_ImpFilterView_Workflow_GADGET_PD.cwl	https://github.com/VisIVOLab/VisIVOCWL.git Path: Workflow_4/docker_VisIVO_ImpFilterView_Workflow_GADGET_PD.cwl Branch/Commit ID: main
	bacterial_kmer	https://github.com/ncbi/pgap.git Path: bacterial_kmer/wf_bacterial_kmer.cwl Branch/Commit ID: dev

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