Explore Workflows

https://github.com/msk-access/qc_generation.git

Path: access_qc__packed.cwl

Branch/Commit ID: develop

Packed ID: qc_collapsed_bam.cwl

https://github.com/mskcc/roslin-variant.git

Path: setup/cwl/module-1.scatter.chunk.cwl

Branch/Commit ID: dev

https://github.com/jarnolaitinen/RD_pipeline.git

Path: workflow_localfiles.cwl

Branch/Commit ID: master

https://github.com/yeolab/eclip.git

Path: cwl/wf_demultiplex_pe.cwl

Branch/Commit ID: master

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/workflow_input_format_expr.cwl

Branch/Commit ID: main

https://git.astron.nl/eosc/prefactor3-cwl.git

Path: workflows/linc_target.cwl

Branch/Commit ID: b139045507381d9fdaad02d719c7b9bfe809fec8

https://github.com/eosc-lofar/presto-cwl.git

Path: presto.cwl

Branch/Commit ID: visualise

https://github.com/simleo/workflow-run-crate.git

Path: tools/cwlprov_to_crate/tld/tld.cwl

Branch/Commit ID: tld_workflow

This workflow step takes the PeptideProphet output files from the first step containing the peptide validation and calculates the protein inference using ProteinProphet.

https://github.com/cwl-apps/fragpipe-proteomics-pipeline-tutorial.git

Path: FragPipe-ProteinProphet/fragpipe-proteinprophet.cwl

Branch/Commit ID: main

https://github.com/nci-gdc/gatk4_mutect2_cwl.git

Path: gatk4-mutect2-tumor-only-cwl/gpas_gatk4.2.4.1_mutect2_tumor_only_workflow.cwl

Branch/Commit ID: master