Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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steplevel-resreq.cwl
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Path: v1.0/v1.0/steplevel-resreq.cwl Branch/Commit ID: master |
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tRNA_selection.cwl
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Path: tools/tRNA_selection.cwl Branch/Commit ID: 5dc7c5c |
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mutect parallel workflow
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Path: subworkflows/mutect.cwl Branch/Commit ID: master |
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wf_clipseqcore_pe_1barcode.cwl
Workflow for handling reads containing one barcode. Returns the bam file containing read2 only. Notes: runs the following steps: - demultiplex - trimfirst_file2string - trimagain_file2string - b1_trim_and_map - view_r2 - index_r2_bam - make_bigwigs |
Path: cwl/wf_clipseqcore_pe_1barcode.cwl Branch/Commit ID: master |
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Exome QC workflow
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Path: definitions/subworkflows/qc_exome.cwl Branch/Commit ID: master |
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orgaquant_wf.cwl
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Path: orgaquant_wf.cwl Branch/Commit ID: 1.1 |
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combine_counts.cwl
Combines read counts (generated by the 01_mpileups workflow) from multiple files into one file. |
Path: 02_combine_counts/combine_counts.cwl Branch/Commit ID: main |
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exome alignment and germline variant detection
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Path: definitions/pipelines/germline_exome.cwl Branch/Commit ID: master |
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sc_atac_seq_prep_process_init.cwl
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Path: sc-atac-seq-pipeline/steps/sc_atac_seq_prep_process_init.cwl Branch/Commit ID: 14985c9 |
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BLAST against rRNA db
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Path: bacterial_noncoding/wf_blastn.cwl Branch/Commit ID: master |
