Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph exomeseq-gatk4-03-organizedirectories.cwl

https://github.com/Duke-GCB/bespin-cwl.git

Path: subworkflows/exomeseq-gatk4-03-organizedirectories.cwl

Branch/Commit ID: gatk4-fixes
workflow graph CNV_pipeline

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/cwl/workflow.cwl

Branch/Commit ID: 1.1.3
workflow graph canine_mutect2_module.cwl

https://github.com/d3b-center/canine-dev.git

Path: subworkflows/canine_mutect2_module.cwl

Branch/Commit ID: master
workflow graph 04-peakcall-se.cwl

ATAC-seq 04 quantification - SE

 https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/ATAC-seq_pipeline/04-peakcall-se.cwl

Branch/Commit ID: master
workflow graph merge_filter.cwl

https://github.com/CompEpigen/ChIPseq_workflows.git

Path: CWL/workflow_modules/merge_filter.cwl

Branch/Commit ID: master
workflow graph extract_fraginfo.cwl

https://github.com/kyusque/abmp_log_dump2pieda.git

Path: extract_fraginfo.cwl

Branch/Commit ID: master
workflow graph workflow_sig.cwl

https://github.com/mr-c/cwltests.git

Path: cwl/workflow_sig.cwl

Branch/Commit ID: pack_test
workflow graph salmon_wf_pe.cwl

https://github.com/pitagora-network/pitagora-cwl.git

Path: workflows/salmon/paired_end/salmon_wf_pe.cwl

Branch/Commit ID: master
workflow graph zip_and_index_vcf.cwl

This is a very simple workflow of two steps. It will zip an input VCF file and then index it. The zipped file and the index file will be in the workflow output.

https://github.com/icgc-tcga-pancancer/oxog-dockstore-tools.git

Path: zip_and_index_vcf.cwl

Branch/Commit ID: 1.0.0
workflow graph rnaseq_pipeline_fastq_checker.cwl

https://github.com/heliumdatacommons/TOPMed_RNAseq_CWL.git

Path: workflow/checker-workflows/rnaseq_pipeline_fastq_checker.cwl

Branch/Commit ID: master