Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph marianas_collapsing_workflow.cwl

https://github.com/mskcc/ACCESS-Pipeline.git

Path: workflows/marianas/marianas_collapsing_workflow.cwl

Branch/Commit ID: master
workflow graph step-valuefrom2-wf.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/step-valuefrom2-wf.cwl

Branch/Commit ID: master
workflow graph hisat2_index.cwl

https://github.com/rawgene/cwl.git

Path: workflows/hisat2_index.cwl

Branch/Commit ID: master
workflow graph rhapsody_targeted_1.9-beta.cwl#VDJ_SplitValidReads.cwl

VDJ_SplitValidReads splits fasta files to be multi-processed in the VDJ step.

https://github.com/longbow0/cwl.git

Path: v1.9-beta/rhapsody_targeted_1.9-beta.cwl

Branch/Commit ID: master

Packed ID: VDJ_SplitValidReads.cwl
workflow graph cnv_gridss

CNV GRIDSS calling

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/cwl/subworkflows/cnv_gridss.cwl

Branch/Commit ID: 1.0.5
workflow graph SetArrayElementCoordinates

Transform array element coordinates into the coordinate system required by the simulation pipeline (i.e., CORSIKA system).

 https://github.com/gammasim/workflows.git

Path: workflows/SetArrayElementCoordinates.cwl

Branch/Commit ID: main
workflow graph workflow1_11.cwl#VDJ_Preprocess_Reads.cwl

https://github.com/GeorgeAlehandro/cwl_1_11.git

Path: workflow1_11.cwl

Branch/Commit ID: main

Packed ID: VDJ_Preprocess_Reads.cwl
workflow graph count-lines6-wf.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/count-lines6-wf.cwl

Branch/Commit ID: main
workflow graph dynresreq-workflow-stepdefault.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/dynresreq-workflow-stepdefault.cwl

Branch/Commit ID: main
workflow graph preprocess.cwl

https://github.com/NCBI-Hackathons/Epigenomics_CWL.git

Path: cwl/tools/preprocess.cwl

Branch/Commit ID: master