Workflow: CreateSymlink-workflow.cwl
Fetched 2025-05-19 19:46:43 GMT
Verified with cwltool version 3.1.20230201224320
- Selected
- |
- Default Values
- Nested Workflows
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- Inputs/Outputs
Unknown workflow license, check
source repository.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| PATH | String[] | ||
| tree | String[] | ||
| gff_name | String[] | ||
| MAIN_PATH | String | ||
| cds_fasta_name | String[] | ||
| deepPATH_bigwig | String[] | ||
| scientific_name | String[] | ||
| deepPATH_analyses | String[] | ||
| genome_fasta_name | String[] | ||
| protein_fasta_name | String[] | ||
| transcript_fasta_name | String[] | ||
| deepPATH_genomic_fasta | String[] |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| bigwig_gzip |
flow_reorganize_symlinks/bigwig_gzip.cwl
(CommandLineTool)
|
||
| setup_folder |
flow_reorganize_symlinks/setup_folder.cwl
(CommandLineTool)
|
||
| scaffold_gzip |
flow_reorganize_symlinks/scaffold_gzip.cwl
(CommandLineTool)
|
||
| analyses_symlink |
flow_reorganize_symlinks/analyses_symlink.cwl
(CommandLineTool)
|
||
| assembly_symlink |
flow_reorganize_symlinks/assembly_symlink.cwl
(CommandLineTool)
|
||
| gzip-conditional |
694fcc032f57c3682fa79523419ae203
(CommandLineTool)
|
||
| scaffold_symlink |
flow_reorganize_symlinks/scaffold_symlink.cwl
(CommandLineTool)
|
||
| bigwig_symlink-gc |
flow_reorganize_symlinks/bigwig_symlink-gc.cwl
(CommandLineTool)
|
||
| annotation_symlink |
flow_reorganize_symlinks/annotation_symlink.cwl
(CommandLineTool)
|
||
| bigwig_symlink-gaps |
flow_reorganize_symlinks/bigwig_symlink-gaps.cwl
(CommandLineTool)
|
||
| analyses_symlink_protein |
flow_reorganize_symlinks/analyses_symlink_protein.cwl
(CommandLineTool)
|
Outputs
There are no outputs in this workflow
Permalink:
https://w3id.org/cwl/view/git/556884e8e205295e561b1d9140d836cdd6c1d8c9/CreateSymlink-workflow.cwl
