Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph HLA LA workflow

https://github.com/mdaya/hla_la_typing.git

Path: HLA_LA_workflow.cwl

Branch/Commit ID: master
workflow graph spaceTxConversion.cwl

https://github.com/hubmapconsortium/spatial-transcriptomics-pipeline.git

Path: steps/spaceTxConversion.cwl

Branch/Commit ID: master
workflow graph Varscan Workflow

https://github.com/litd/analysis-workflows.git

Path: definitions/subworkflows/varscan_pre_and_post_processing.cwl

Branch/Commit ID: master
workflow graph bwa_index

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/subworkflows/bwa_index.cwl

Branch/Commit ID: 3bb03c9b
workflow graph cram_to_bam workflow

https://github.com/genome/cancer-genomics-workflow.git

Path: cram_to_bam/workflow.cwl

Branch/Commit ID: toil_compatibility
workflow graph wf_input_norm_and_entropy.cwl

This workflow normalizes clip aligned reads against a size-matched input sample. Then, an entropy score is calculated for each peak found.

https://github.com/YeoLab/merge_peaks.git

Path: cwl/wf_input_norm_and_entropy.cwl

Branch/Commit ID: master
workflow graph wf-variantcall.cwl

https://github.com/bcbio/bcbio_validation_workflows.git

Path: NA12878-chr20/NA12878-platinum-chr20-workflow-arvados/wf-variantcall.cwl

Branch/Commit ID: master
workflow graph compile1.cwl#main

https://github.com/common-workflow-language/workflows.git

Path: workflows/compile/compile1.cwl

Branch/Commit ID: feature/feature-GATK-Yassine

Packed ID: main
workflow graph Unaligned BAM to BQSR and VCF

https://github.com/fgomez02/analysis-workflows.git

Path: definitions/subworkflows/bam_to_bqsr_no_dup_marking.cwl

Branch/Commit ID: No_filters_detect_variants
workflow graph step-valuefrom4-wf.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/step-valuefrom4-wf.cwl

Branch/Commit ID: master