Explore Workflows

Simple 2 step workflow to check that workflow steps are independently picking up on the number of processes. First run the parallel get PIDs step (on the input num procs) then run (on a single proc) the line count. This should equal the input.

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/mpi_simple_wf.cwl

Branch/Commit ID: main

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/pass-unconnected.cwl

Branch/Commit ID: main

https://github.com/andurill/ACCESS-Pipeline.git

Path: workflows/QC/qc_workflow.cwl

Branch/Commit ID: 0.0.33_dmp

https://github.com/bespin-workflows/exomeseq-gatk4.git

Path: subworkflows/exomeseq-gatk4-02-variantdiscovery.cwl

Branch/Commit ID: develop

https://github.com/PMCC-BioinformaticsCore/janis-pipelines.git

Path: janis_pipelines/wgs_somatic/cwl/tools/PerformanceSummaryGenome_v0_1_0.cwl

Branch/Commit ID: master

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/step-valuefrom5-wf.cwl

Branch/Commit ID: main

https://gitlab.ebrains.eu/sofiakar/yre-standardised-workflows.git

Path: Workflows/PSD_workflow_bucket_1/workflow_p.cwl

Branch/Commit ID: poster

https://github.com/nlesc-sherlock/corporadb.git

Path: cwl/runAll.cwl

Branch/Commit ID: master

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/pipelines/detect_variants_nonhuman.cwl

Branch/Commit ID: low-vaf

https://github.com/pitagora-network/pitagora-cwl.git

Path: workflows/star-stringtie/single_end/star-stringtie_wf_se.cwl

Branch/Commit ID: master