Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph 04-quantification-se-stranded.cwl

RNA-seq 04 quantification

 https://github.com/Duke-GCB/GGR-cwl.git

Path: v1.0/RNA-seq_pipeline/04-quantification-se-stranded.cwl

Branch/Commit ID: master
workflow graph BuildCembaReferences.cwl

https://github.com/common-workflow-lab/wdl-cwl-translator.git

Path: wdl2cwl/tests/cwl_files/BuildCembaReferences.cwl

Branch/Commit ID: main
workflow graph io-any-wf-1.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/io-any-wf-1.cwl

Branch/Commit ID: main
workflow graph schemadef-wf.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/schemadef-wf.cwl

Branch/Commit ID: main
workflow graph wf_rnaediting2strands.cwl

https://github.com/YeoLab/sailor.git

Path: cwl/wf_rnaediting2strands.cwl

Branch/Commit ID: master
workflow graph textures.cwl

Create emblem textures

 https://github.com/undu/stellaris-emblem-lab.git

Path: textures/textures.cwl

Branch/Commit ID: master
workflow graph workflow.cwl

Implementing bamqc over and over again to get an idea of how easy or hard it is for a beginner to implement a basic workflow in different workflow systems.

https://github.com/garyluu/one-workflow-many-ways.git

Path: cwl/workflow.cwl

Branch/Commit ID: master
workflow graph Hello World

Outputs a message using echo

 https://github.com/YangYang-Lcos/legacy.git

Path: workflows/hello/hello-param.cwl

Branch/Commit ID: master
workflow graph count-lines9-wf-noET.cwl

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/count-lines9-wf-noET.cwl

Branch/Commit ID: master
workflow graph dedup-3-pass.cwl

run 3-pass dedup: algo LocusCollector + algo Dedup output_dup_read_name + algo Dedup dedup_by_read_name sequentially

 https://github.com/Sentieon/Sentieon-cwl.git

Path: stage/dedup-3-pass.cwl

Branch/Commit ID: master