Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph fusion_workflow.cwl

Fusion workflow, runs STARFusion and Arriba

https://github.com/BD2KGenomics/dockstore_workflow_fusion.git

Path: fusion_workflow.cwl

Branch/Commit ID: master

workflow graph forome_vcf_upload_archive.cwl

https://github.com/ForomePlatform/vcf-upload-cwl-pipeline.git

Path: forome_vcf_upload_archive.cwl

Branch/Commit ID: main

workflow graph etl.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/dnaseq/etl.cwl

Branch/Commit ID: 1.1

workflow graph Functional analyis of sequences that match the 16S SSU

https://github.com/farahzkhan/ebi-metagenomics-cwl.git

Path: workflows/16S_taxonomic_analysis.cwl

Branch/Commit ID: master

workflow graph collate_unique_SSU_headers.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/collate_unique_SSU_headers.cwl

Branch/Commit ID: c1f8b22

workflow graph output.cwl

https://github.com/CERIT-SC/fireprot.git

Path: output.cwl

Branch/Commit ID: master

workflow graph CNA Pipeline

https://github.com/ChrisMaherLab/PACT.git

Path: pipelines/cna_pipeline.cwl

Branch/Commit ID: master

workflow graph Apply filters to VCF file

https://github.com/ChrisMaherLab/PACT.git

Path: subworkflows/filter_vcf.cwl

Branch/Commit ID: master

workflow graph BlastP_RBH_workflow

https://github.com/ncbi/cwl-demos.git

Path: blast-pipelines/blast_workflow.cwl

Branch/Commit ID: master

workflow graph Bisulfite alignment and QC

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/pipelines/bisulfite.cwl

Branch/Commit ID: low-vaf