Explore Workflows
View already parsed workflows here or click here to add your own
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zip_and_index_vcf.cwl
This is a very simple workflow of two steps. It will zip an input VCF file and then index it. The zipped file and the index file will be in the workflow output. |
Path: zip_and_index_vcf.cwl Branch/Commit ID: master |
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rRNA_selection.cwl
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Path: tools/rRNA_selection.cwl Branch/Commit ID: 5dc7c5c |
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01-qc-se.cwl
ATAC-seq 01 QC - reads: SE |
Path: v1.0/ATAC-seq_pipeline/01-qc-se.cwl Branch/Commit ID: v1.0 |
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emblem_textures.cwl
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Path: textures/emblem_textures.cwl Branch/Commit ID: master |
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phase VCF
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Path: definitions/subworkflows/phase_vcf.cwl Branch/Commit ID: No_filters_detect_variants |
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search.cwl#main
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Path: v1.0/v1.0/search.cwl Branch/Commit ID: master Packed ID: main |
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RNASelector as a CWL workflow
https://doi.org/10.1007/s12275-011-1213-z |
Path: workflows/rna-selector.cwl Branch/Commit ID: 0cd2d70 |
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any-type-compat.cwl
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Path: tests/any-type-compat.cwl Branch/Commit ID: main |
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EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.
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Path: workflows/emg-qc-paired.cwl Branch/Commit ID: 3f85843 |
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process VCF workflow
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Path: strelka/process_vcf.cwl Branch/Commit ID: master |
