Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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fusion_workflow.cwl
Fusion workflow, runs STARFusion and Arriba |
Path: fusion_workflow.cwl Branch/Commit ID: 1.0.0 |
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rhapsody_pipeline_2.0.cwl#VDJ_Analyze_Reads_TCR.cwl
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Path: rhapsody_pipeline_2.0.cwl Branch/Commit ID: main Packed ID: VDJ_Analyze_Reads_TCR.cwl |
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blast-scatter-flow-needs-work.cwl
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Path: cwl/blast-scatter-flow-needs-work.cwl Branch/Commit ID: master |
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wf-loadContents2.cwl
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Path: tests/wf-loadContents2.cwl Branch/Commit ID: master |
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input_bam_processing_workflow.cwl
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Path: rnaseq-star-align/subworkflows/preprocessing/input_bam_processing_workflow.cwl Branch/Commit ID: master |
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wf_trim_partial_and_map_se.cwl
This workflow takes in appropriate trimming params and demultiplexed reads, and performs the following steps in order: trimx1, trimx2, fastq-sort, filter repeat elements, fastq-sort, genomic mapping, sort alignment, index alignment, namesort, PCR dedup, sort alignment, index alignment |
Path: cwl/wf_trim_partial_and_map_se.cwl Branch/Commit ID: master |
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echo-workflow.cwl
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Path: _includes/cwl/echo-workflow.cwl Branch/Commit ID: gh-pages |
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process VCF workflow
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Path: subworkflows/strelka_process_vcf.cwl Branch/Commit ID: master |
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panel of normals workflow
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Path: panel_of_normals/workflow.cwl Branch/Commit ID: master |
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exome alignment and germline variant detection
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Path: definitions/subworkflows/germline_detect_variants.cwl Branch/Commit ID: master |
