Workflow: BlastP_RBH_workflow
Fetched 2024-11-26 06:56:27 GMT
Verified with cwltool version 3.1.20221201130942
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
Unknown workflow license, check
source repository.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| user_db_dir | Directory | ||
| user_query1 | File | ||
| user_query2 | File | ||
| user_db_flag | String | ||
| user_out_flag1 | String | ||
| user_out_flag2 | String | ||
| user_out_results | String | ||
| user_outfmt_flag | String | ||
| user_taxid_flag1 | String | ||
| user_taxid_flag2 | String | ||
| user_num_threads_flag | Integer (Optional) |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| rbh_python |
python_step.cwl
(CommandLineTool)
|
Process two tabular BLAST outputs and return RBHs |
Process two tabular BLAST outputs and return RBHs |
| blast_step1 |
blastp_docker.cwl
(CommandLineTool)
|
BLASTP search. | |
| blast_step2 |
blastp_docker.cwl
(CommandLineTool)
|
BLASTP search. |
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| blast_out_class | File |
Permalink:
https://w3id.org/cwl/view/git/496b3e2bff8c20d5a7d5c3cbe9b64697767b1c13/blast-pipelines/blast_workflow.cwl
