Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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hecil.cwl
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https://github.com/Alves-Bruno/hecil-cwl.git
Path: hecil.cwl Branch/Commit ID: master |
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cram_to_bam workflow
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https://github.com/apaul7/cancer-genomics-workflow.git
Path: definitions/subworkflows/cram_to_bam_and_index.cwl Branch/Commit ID: low-vaf |
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qiime2 demux sequences
Demultiplexing sequences from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/ |
https://github.com/Duke-GCB/bespin-cwl.git
Path: packed/qiime2-step1-import-demux.cwl Branch/Commit ID: qiime2-workflow-paired Packed ID: qiime2-02-demux.cwl |
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compile1.cwl#main
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https://github.com/common-workflow-language/workflows.git
Path: workflows/compile/compile1.cwl Branch/Commit ID: master Packed ID: main |
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myWorkflow2.cwl
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https://github.com/pascmont/cwltest.git
Path: myWorkflow2.cwl Branch/Commit ID: main |
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env-wf1.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/env-wf1.cwl Branch/Commit ID: main |
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workflow.cwl
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https://github.com/NAL-i5K/Organism_Onboarding.git
Path: flow_dispatch/2other_species/workflow.cwl Branch/Commit ID: master |
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bam to trimmed fastqs and HISAT alignments
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https://github.com/fgomez02/analysis-workflows.git
Path: definitions/subworkflows/bam_to_trimmed_fastq_and_hisat_alignments.cwl Branch/Commit ID: No_filters_detect_variants |
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pcawg_minibam_wf.cwl
This workflow will run OxoG, variantbam, and annotate. Run this as `dockstore --script --debug workflow launch --descriptor cwl --local-entry --entry ./oxog_varbam_annotate_wf.cwl --json oxog_varbam_annotat_wf.input.json ` |
https://github.com/ICGC-TCGA-PanCancer/pcawg-minibam.git
Path: pcawg_minibam_wf.cwl Branch/Commit ID: master |
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Functional analyis of sequences that match the 16S SSU
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/16S_taxonomic_analysis.cwl Branch/Commit ID: 930a2cf |
