Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph functional analysis prediction with InterProScan

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/functional_analysis.cwl

Branch/Commit ID: a8abd0e
workflow graph predict-workflow.cwl

https://github.com/johnbradley/iMADS-worker.git

Path: predict_service/predict-workflow.cwl

Branch/Commit ID: master
workflow graph facets

https://github.com/mskcc/roslin-variant.git

Path: setup/cwl/facets.cwl

Branch/Commit ID: 2.4.x
workflow graph zip_and_index_vcf.cwl

This is a very simple workflow of two steps. It will zip an input VCF file and then index it. The zipped file and the index file will be in the workflow output.

https://github.com/svonworl/oxog-dockstore-tools.git

Path: zip_and_index_vcf.cwl

Branch/Commit ID: master
workflow graph Unaligned BAM to BQSR and VCF

https://github.com/markrobbo/workflows.git

Path: workflows/hello/exome_alignment_packed.cwl

Branch/Commit ID: master

Packed ID: workflow.cwl_2
workflow graph workflow.cwl

https://github.com/ljdursi/cwl-tutorial.git

Path: bioinformatics/tools/workflow.cwl

Branch/Commit ID: master
workflow graph Functional analyis of sequences that match the 16S SSU

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/16S_taxonomic_analysis.cwl

Branch/Commit ID: fa86fce
workflow graph bam-bedgraph-bigwig.cwl

https://github.com/Barski-lab/ga4gh_challenge.git

Path: subworkflows/bam-bedgraph-bigwig.cwl

Branch/Commit ID: v0.0.3
workflow graph stats.cwl

https://github.com/EBI-Metagenomics/CWL-assembly.git

Path: cwl/stats/stats.cwl

Branch/Commit ID: demo
workflow graph split-bams-by-strand-and-index.cwl

Split reads in a BAM file by strands and index forward and reverse output BAM files

 https://github.com/Duke-GCB/GGR-cwl.git

Path: v1.0/quant/split-bams-by-strand-and-index.cwl

Branch/Commit ID: master