Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
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qiime2 demux paired sequences
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![]() Path: packed/qiime2-step1-import-demux-paired.cwl Branch/Commit ID: ef08cb00bd55b4c712645d171dbc691e01ed6165 Packed ID: qiime2-02-demux-emp-paired.cwl |
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workflow_simple.cwl
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![]() Path: CWL/workflow_simple.cwl Branch/Commit ID: f0b553d37e4255a3291393948f3e308bd88ed301 |
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per_cluster_workflow.cwl
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![]() Path: CWL/per_cluster_workflow.cwl Branch/Commit ID: f0b553d37e4255a3291393948f3e308bd88ed301 |
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tRNA_selection.cwl
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![]() Path: tools/tRNA_selection.cwl Branch/Commit ID: caea457b17388fdc5cb088364c194504ae736bdd |
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rRNA_selection.cwl
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![]() Path: tools/rRNA_selection.cwl Branch/Commit ID: a8abd0e66de7b5ffe24cfe7f39d7027103c6d3b4 |
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pcawg_annotate_wf.cwl
This workflow will run OxoG, variantbam, and annotate. Run this as `dockstore --script --debug workflow launch --descriptor cwl --local-entry --entry ./oxog_varbam_annotate_wf.cwl --json oxog_varbam_annotat_wf.input.json ` |
![]() Path: pcawg_annotate_wf.cwl Branch/Commit ID: b4a02b7ba5733b3cc5b84b79ab0634ff9e4d1aeb |
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rRNA_selection.cwl
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![]() Path: tools/rRNA_selection.cwl Branch/Commit ID: c2110714be230861ee7b96adc3db6e32e5248c57 |
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collate_unique_SSU_headers.cwl
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![]() Path: tools/collate_unique_SSU_headers.cwl Branch/Commit ID: c1f8b22dc4da88c998cb00f4b2bebdff8c3632d7 |
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checker_workflow_wrapping_workflow.cwl
This demonstrates how to wrap a \"real\" workflow with a checker workflow that runs both the tool and a tool that performs verification of results |
![]() Path: checker_workflow_wrapping_workflow.cwl Branch/Commit ID: 82f37121c2b8be9529f8ee6f104a0c198c16c173 |
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metaphlan_wfl.cwl
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![]() Path: metaphlan_wfl.cwl Branch/Commit ID: 9b824c91cebb726f8e7d87c5f1f5760333fed9be |