Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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assemble.cwl
Assemble a set of reads using SKESA |
https://github.com/ncbi/pgap.git
Path: assemble.cwl Branch/Commit ID: f225cd99b0e0a5043dd102f8b33a6139fefe9ea4 |
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assembly-2.cwl
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https://github.com/EBI-Metagenomics/pipeline-v5.git
Path: workflows/conditionals/assembly/assembly-2.cwl Branch/Commit ID: fff6fa392370b56e1fe7c374167ba73df3018775 |
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RNA-Seq alignment and transcript/gene abundance workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/rnaseq.cwl Branch/Commit ID: db0a91eb094d0a7c58042d4264986ea042dd4827 |
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kmer_cache_retrieve
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_cache_retrieve.cwl Branch/Commit ID: f390475a4e0898d4933f0a28dae278aa35803eb1 |
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kmer_build_tree
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_build_tree.cwl Branch/Commit ID: f390475a4e0898d4933f0a28dae278aa35803eb1 |
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secret_wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/secret_wf.cwl Branch/Commit ID: e6a1e1f3a3b3168028bd19aaf465826fa276a35b |
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mut2.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/mut2.cwl Branch/Commit ID: 0e8110083bad6ea98fc487aa262953a6c5e010b5 |
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filter-pcr-artifacts.cwl
DNase-seq - map - Filter PCR Artifacts |
https://github.com/duke-gcb/ggr-cwl.git
Path: v1.0/map/filter-pcr-artifacts.cwl Branch/Commit ID: c269cecf317c699d6f3a0f44782e90914bce62b5 |
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alignment for mouse with qc
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/alignment_wgs_mouse.cwl Branch/Commit ID: c23dc7f113ca0b0a3127a5d6c696e98d4799460c |
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Running cellranger count and lineage inference
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/single_cell_rnaseq.cwl Branch/Commit ID: 789267ce0e3fed674ea5212a562315218fcf1bfc |
