Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Varscan Workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/varscan_pre_and_post_processing.cwl Branch/Commit ID: 509938802c5e42bb8084c6a5a26ab6425c60e69a
	bact_get_kmer_reference	https://github.com/ncbi/pgap.git Path: task_types/tt_bact_get_kmer_reference.cwl Branch/Commit ID: 5ec226c941562124032ca6861bc8d1aeabf9d91a
	bact_get_kmer_reference	https://github.com/ncbi/pgap.git Path: task_types/tt_bact_get_kmer_reference.cwl Branch/Commit ID: 551493f5c24b757a46cd22821a05e6ac6dcceb7f
	Detect Variants workflow for WGS pipeline	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/detect_variants_wgs.cwl Branch/Commit ID: 04d21c33a5f2950e86db285fa0a32a6659198d8a
	revsort.cwl Reverse the lines in a document, then sort those lines.	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/revsort.cwl Branch/Commit ID: 9f3b9e7b74d5a904b12674dfd1300b56a48c3d33
	exomeseq.cwl#exomeseq-03-organizedirectories.cwl	https://github.com/Duke-GCB/bespin-cwl.git Path: packed/exomeseq.cwl Branch/Commit ID: ef08cb00bd55b4c712645d171dbc691e01ed6165 Packed ID: exomeseq-03-organizedirectories.cwl
	extract_gencoll_ids	https://github.com/ncbi/pgap.git Path: task_types/tt_extract_gencoll_ids.cwl Branch/Commit ID: 551493f5c24b757a46cd22821a05e6ac6dcceb7f
	Filter single sample sv vcf from depth callers(cnvkit/cnvnator)	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/sv_depth_caller_filter.cwl Branch/Commit ID: 389f6edccab082d947bee9c032f59dbdf9f7c325
	align_merge_sas	https://github.com/ncbi/pgap.git Path: task_types/tt_align_merge_sas.cwl Branch/Commit ID: b560e3abadfb150a0013376d7a189df066ab56f9
	extract_gencoll_ids	https://github.com/ncbi-gpipe/pgap.git Path: task_types/tt_extract_gencoll_ids.cwl Branch/Commit ID: b360e89d85d83ba3b863bf86074c0ec7e5c58f48