Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Optimize cuts and Generate IRF

Optimize event selection and compute an IRF using the results.

https://gitlab.cta-observatory.org/cta-computing/dpps/datapipe/datapipe.git

Path: workflows/workflow_optimize_and_irf.cwl

Branch/Commit ID: 1667a96a2fe63d347cfe91d7d28d80898078ce86
workflow graph exome alignment and somatic variant detection

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/somatic_exome.cwl

Branch/Commit ID: e509210450e4c62aecb99a228fc97f0eae2d9580
workflow graph gcaccess_from_list

https://github.com/ncbi/pgap.git

Path: task_types/tt_gcaccess_from_list.cwl

Branch/Commit ID: 861d9baa067af98d794ba0ed4e43aa42e37d8a24
workflow graph ani_top_n

https://github.com/ncbi/pgap.git

Path: task_types/tt_ani_top_n.cwl

Branch/Commit ID: 933a0b7554e4ae76a86d25c76b408b5dfc8ed1e3
workflow graph workflow_input_sf_expr.cwl

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/workflow_input_sf_expr.cwl

Branch/Commit ID: 4a8390d897913c3776a0d2b2a01e1e6134b968bc
workflow graph heatmap.cwl

Generates ATDP heatmap centered on TSS from an array of input BAM files and genelist TSV file. Returns array of heatmap JSON files with the names that have the same basenames as input BAM files, but with .json extension

https://github.com/Barski-lab/workflows.git

Path: workflows/heatmap.cwl

Branch/Commit ID: b25b17651171f32005e9d879a9a049382f044baf
workflow graph kmer_top_n_extract

https://github.com/ncbi/pgap.git

Path: task_types/tt_kmer_top_n_extract.cwl

Branch/Commit ID: 68b828ac482956a03325623d817780986f34fb31
workflow graph bams-workflow-sv.cwl

https://github.com/mskcc/argos-cwl.git

Path: workflows/bams-workflow-sv.cwl

Branch/Commit ID: eb1c641d3134e7e13bc1a15fe7d8de7937527aca
workflow graph taxonomy_check_16S

https://github.com/ncbi/pgap.git

Path: task_types/tt_taxonomy_check_16S.cwl

Branch/Commit ID: e351f650524b532f85820b8e53855010b35046c2
workflow graph tt_kmer_top_n.cwl

https://github.com/ncbi/pgap.git

Path: task_types/tt_kmer_top_n.cwl

Branch/Commit ID: 2a81fcde75ca7665814c8de2210c7bc3121a08a3