Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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default-wf5.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/default-wf5.cwl Branch/Commit ID: efd59864c24d97e6d0d1d273025d3ef9003fa44d |
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RNA-Seq alignment and transcript/gene abundance workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/rnaseq.cwl Branch/Commit ID: ae57b60e9b01e3f0f02f4e828042748409dff5a3 |
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align_sort_sa
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https://github.com/ncbi/pgap.git
Path: task_types/tt_align_sort_sa.cwl Branch/Commit ID: 9abcceb95c8dcb74b98d7eeda265d8f3a9a4329e |
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running cellranger mkfastq and count
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/cellranger_mkfastq_and_count.cwl Branch/Commit ID: 24e5290aec441665c6976ee3ee8ae3574c49c6b5 |
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conflict.cwl#main
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/conflict.cwl Branch/Commit ID: 544f108b906c179520b0a6d64c3c21d168b48fa2 Packed ID: main |
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gathered exome alignment and somatic variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/somatic_exome_gathered.cwl Branch/Commit ID: 038cb3617a1966a1057386adcde97ce55d9e1139 |
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align-test-files-pack.cwl#main
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https://github.com/KBNLresearch/ochre.git
Path: ochre/cwl/align-test-files-pack.cwl Branch/Commit ID: d187a94a601e806e001d31362ba0c9c2534eb426 Packed ID: main |
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mut3.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/mut3.cwl Branch/Commit ID: 20f01e04328537714e57d136e242d3e7a9d44266 |
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GATK4_SomaticVariantCaller_4_1_3_0.cwl
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https://github.com/PMCC-BioinformaticsCore/janis-pipelines.git
Path: janis_pipelines/wgs_somatic/cwl/tools/GATK4_SomaticVariantCaller_4_1_3_0.cwl Branch/Commit ID: c287ec74267425b1e70ee1f64b6219806c81779b |
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bacterial_orthology_cond
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https://github.com/ncbi/pgap.git
Path: bacterial_orthology/wf_bacterial_orthology_conditional.cwl Branch/Commit ID: f3bc91cf1320f75967ec2719b1506b75f23cb4b6 |
