Workflow: cnv_manta
Fetched 2025-10-20 19:08:37 GMT
Verified with cwltool version 3.1.20230201224320
CNV Manta calling
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
This workflow is Open Source and may be reused according to the terms of:
Apache License 2.0
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| bed | File | ||
| bams | File[] | ||
| exome | Boolean | ||
| min_q | String | ||
| max_len | String | ||
| min_len | String | ||
| samples | File | ||
| enable_manta | Boolean | ||
| reference_genome | File |
Steps
There are no steps in this workflow
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| output | File (Optional) |
Permalink:
https://w3id.org/cwl/view/git/992f84a959e1776acf3be77d2ca15fe11fa8673d/structuralvariants/subworkflows/cnv_manta.cwl
