Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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spurious_annot
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https://github.com/ncbi/pgap.git
Path: spurious_annot/wf_spurious_annot_pass1.cwl Branch/Commit ID: 505b91e41741ccbcd5ebd2b6a09a3be604f9ece3 |
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Replace legacy AML Trio Assay
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/aml_trio_cle.cwl Branch/Commit ID: 061d3a2fbcd8a1c39c0b38c549e528deb24a9d54 |
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Get Proteins
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https://github.com/ncbi/pgap.git
Path: wf_bacterial_prot_src.cwl Branch/Commit ID: 505b91e41741ccbcd5ebd2b6a09a3be604f9ece3 |
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spurious_annot pass2
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https://github.com/ncbi/pgap.git
Path: spurious_annot/wf_spurious_annot_pass2.cwl Branch/Commit ID: 505b91e41741ccbcd5ebd2b6a09a3be604f9ece3 |
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Apply filters to VCF file
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/germline_filter_vcf.cwl Branch/Commit ID: 788bdc99c1d5b6ee7c431c3c011eb30d385c1370 |
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wgs alignment and germline variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/germline_wgs.cwl Branch/Commit ID: 788bdc99c1d5b6ee7c431c3c011eb30d385c1370 |
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bam_filtering
BAM filtering |
https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/cwl/subworkflows/bam_filtering.cwl Branch/Commit ID: 9ac2d150a57d1996210ed6a44dd0c0404dab383c |
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final-workflow.cwl
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https://github.com/nal-i5k/organism_onboarding.git
Path: final-workflow.cwl Branch/Commit ID: b1e1b906fcfb2c0fad8811fb8ab03009282c1d19 |
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hisat2-stringtie_wf_pe.cwl
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https://github.com/pitagora-network/pitagora-cwl.git
Path: workflows/hisat2-stringtie/paired_end/hisat2-stringtie_wf_pe.cwl Branch/Commit ID: cd79f2db4b166d205456ab718e2581d6ab6e9f23 |
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exome alignment and somatic variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/somatic_exome_nonhuman.cwl Branch/Commit ID: 43c790e2ee6a0f3f42e40fb4d9a9005eb8de747a |
