Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	exome alignment with qc	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/alignment_exome.cwl Branch/Commit ID: 3042812447d9e8889c6118986490e9c9b9b13223
	revsort.cwl Reverse the lines in a document, then sort those lines.	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/revsort.cwl Branch/Commit ID: ead263db0e167db39ddbdc79b04d343943d129b6
	Build Bowtie indices Workflow runs [Bowtie](http://bowtie-bio.sourceforge.net/tutorial.shtml) v1.2.0 (12/30/2016) to build indices for reference genome provided in a single FASTA file as fasta_file input. Generated indices are saved in a folder with the name that corresponds to the input genome	https://github.com/datirium/workflows.git Path: workflows/bowtie-index.cwl Branch/Commit ID: 3fc68366adb179927af5528c27b153abaf94494d
	Filter Protein Alignments I	https://github.com/ncbi/pgap.git Path: protein_alignment/wf_align_filter.cwl Branch/Commit ID: 2d54b11cc9891c9aa52515fe4f8cd9cba12c6629
	iwdr_with_nested_dirs.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/iwdr_with_nested_dirs.cwl Branch/Commit ID: 0184e647cde1bc44279107d6df31b3ebb138769c
	1st-workflow.cwl	https://github.com/common-workflow-language/common-workflow-language.git Path: v1.0/examples/1st-workflow.cwl Branch/Commit ID: 40fcfc01812046f012acf5153cc955ee848e69e3
	Merge, annotate, and generate a TSV for SVs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/merge_svs.cwl Branch/Commit ID: f0cdc773e31e4aa116838e8aba4954c31bd3d68b
	wffail.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/wffail.cwl Branch/Commit ID: efb40a812cdba2df6699f130ee5aeea9b63045cd
	gp_makeblastdb	https://github.com/ncbi/pgap.git Path: progs/gp_makeblastdb.cwl Branch/Commit ID: 2d54b11cc9891c9aa52515fe4f8cd9cba12c6629
	Identification_workflow.cwl	https://github.com/adamscharlotte/CWL-workflow.git Path: Identification_workflow.cwl Branch/Commit ID: 1272d1cddc990657ea486c0cade7832e411fa66a