Explore Workflows
View already parsed workflows here or click here to add your own
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Running cellranger count and lineage inference
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Path: definitions/subworkflows/single_cell_rnaseq.cwl Branch/Commit ID: low-vaf |
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rw-flow.cwl
run multiple rw stages sequentially using earlier step output as later stage input_bam |
Path: stage/rw-flow.cwl Branch/Commit ID: master |
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WGS and MT analysis for fastq files
rna / protein - qc, preprocess, filter, annotation, index, abundance |
Path: CWL/Workflows/wgs-noscreen-fastq.workflow.cwl Branch/Commit ID: master |
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regtools workflow
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Path: regtools/workflow.cwl Branch/Commit ID: master |
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rna_prediction-sub-wf.cwl
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Path: workflows/subworkflows/rna_prediction-sub-wf.cwl Branch/Commit ID: master |
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per-sample.cwl
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Path: per-sample/Workflows/per-sample.cwl Branch/Commit ID: main |
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qc_workflow.cwl
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Path: workflows/QC/qc_workflow.cwl Branch/Commit ID: 0.0.33_dmp |
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mut.cwl
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Path: tests/wf/mut.cwl Branch/Commit ID: 07ebbea2bdf97955060c1dd563580b386388519b |
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project-workflow.cwl
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Path: project-workflow.cwl Branch/Commit ID: master |
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scRNA-seq pipeline using Salmon and Alevin
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Path: pipeline.cwl Branch/Commit ID: ce04e2c |
