Workflow: binning.cwl
Fetched 2025-07-12 07:40:52 GMT
Verified with cwltool version 3.1.20230201224320
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
This workflow is Open Source and may be reused according to the terms of:
Apache License 2.0
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| reads | File[] | ||
| contigs | File |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| bin_refinement |
../tools/metawrap_bin_refinement.cwl
(CommandLineTool)
|
metaWrap bin refinement |
https://arxiv.org/abs/1604.03071 http://cab.spbu.ru/files/release3.12.0/manual.html#meta |
| metawrap_binning |
../tools/metawrap_binning.cwl
(CommandLineTool)
|
metaWrap binning tool |
https://arxiv.org/abs/1604.03071 http://cab.spbu.ru/files/release3.12.0/manual.html#meta |
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| refined_bins | File[] |
Permalink:
https://w3id.org/cwl/view/git/895abf7343a1039e5fd7a509af082425009be2dd/workflows/binning.cwl
