Workflow: binning.cwl

Fetched 2020-02-22 16:24:49 GMT
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Inputs

ID Type Title Doc
reference_fastas File[]
contigs File
reads File[]

Steps

ID Runs Label Doc
bin_refinement
../tools/metawrap_bin_refinement.cwl (CommandLineTool)
metaWrap binning tool

https://arxiv.org/abs/1604.03071 http://cab.spbu.ru/files/release3.12.0/manual.html#meta

metawrap_binning
../tools/metawrap_binning.cwl (CommandLineTool)
metaWrap binning tool

https://arxiv.org/abs/1604.03071 http://cab.spbu.ru/files/release3.12.0/manual.html#meta

Outputs

ID Type Label Doc
maxbin2_bins Directory
concoct_bins Directory
refined_bins File[]
metabat2_bins Directory
Permalink: https://w3id.org/cwl/view/git/56a9e2b08ecc2e3e86a90b7b9ab8195be74b12a2/workflows/binning.cwl