Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
Bisulfite alignment and QC
|
https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/bisulfite.cwl Branch/Commit ID: 742dbafb5fb103d8578f48a0576c14dd8dae3b2a |
|
|
|
conflict-wf.cwl#collision
|
https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/conflict-wf.cwl Branch/Commit ID: fe164457f370c2dfec5156f6d6d45818d53cb871 Packed ID: collision |
|
|
|
Alignment without BQSR
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/sequence_to_bqsr_mouse.cwl Branch/Commit ID: e8b7759826df40b8bb821b40b15aea960a4951c4 |
|
|
|
Varscan Workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/varscan_germline.cwl Branch/Commit ID: e8b7759826df40b8bb821b40b15aea960a4951c4 |
|
|
|
qiime2 importing data
Obtaining and importing data from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/ |
https://github.com/Duke-GCB/bespin-cwl.git
Path: packed/qiime2-step1-import-demux.cwl Branch/Commit ID: e2dc95d4f12210359360d814382e7201d836dfcf Packed ID: qiime2-01-import-data.cwl |
|
|
|
workflow.cwl
|
https://github.com/NAL-i5K/Organism_Onboarding.git
Path: flow_dispatch/2working_files/workflow.cwl Branch/Commit ID: c73baa5e10f074be767be0ff8691fdbc2047ef4a |
|
|
|
Downsample and HaplotypeCaller
|
https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/downsample_and_recall.cwl Branch/Commit ID: e8b7759826df40b8bb821b40b15aea960a4951c4 |
|
|
|
process VCF workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/strelka_process_vcf.cwl Branch/Commit ID: e8b7759826df40b8bb821b40b15aea960a4951c4 |
|
|
|
process VCF workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/strelka_process_vcf.cwl Branch/Commit ID: 742dbafb5fb103d8578f48a0576c14dd8dae3b2a |
|
|
|
readme-assembly-workflow.cwl
|
https://github.com/nal-i5k/organism_onboarding.git
Path: flow_create_readme/readme-assembly-workflow.cwl Branch/Commit ID: c73baa5e10f074be767be0ff8691fdbc2047ef4a |
