Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	vecscreen.cwl	https://github.com/ncbi/pgap.git Path: vecscreen/vecscreen.cwl Branch/Commit ID: 0bc1c33a2293e054ad00974971edc79c13252cc7
	tt_blastn_wnode	https://github.com/ncbi/pgap.git Path: task_types/tt_blastn_wnode.cwl Branch/Commit ID: be5ae41801b19ebc69a2889d8fdb39e8e2359611
	pipeline-pe-blacklist-removal.cwl ATAC-seq pipeline - reads: PE - with blacklist removal	https://github.com/alexbarrera/GGR-cwl.git Path: v1.0/ATAC-seq_pipeline/pipeline-pe-blacklist-removal.cwl Branch/Commit ID: 4e568335133405d28f4b73ae11e7f51f2900dfa3
	vecscreen.cwl	https://github.com/ncbi/pgap.git Path: vecscreen/vecscreen.cwl Branch/Commit ID: bba6c580ab88e077f6aa2c2ee7c73159f3f9156e
	unifiedgenotyper.cwl	https://github.com/uc-cdis/genomel_pipelines.git Path: genomel/cwl/workflows/variant_calling/unifiedgenotyper.cwl Branch/Commit ID: 28bb82ba031041321ff9caa5c299ec1bb15d7471
	harmonization_novoalign.cwl	https://github.com/uc-cdis/genomel_pipelines.git Path: genomel/cwl/workflows/harmonization/harmonization_novoalign.cwl Branch/Commit ID: 28bb82ba031041321ff9caa5c299ec1bb15d7471
	Unaligned to aligned BAM	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/align.cwl Branch/Commit ID: c625e05eefb1754353c1bdfa46c01dc61e6233dd
	Subworkflow that runs cnvkit in single sample mode and returns a vcf file	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/cnvkit_single_sample.cwl Branch/Commit ID: 4b5970dcf08bac2598e62ffd2673e67a25004c40
	exome alignment and germline variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/germline_exome.cwl Branch/Commit ID: 9e5f228bc1a3d0dfe950b5d41d7e4319e834a6d4
	gp_makeblastdb	https://github.com/ncbi/pgap.git Path: progs/gp_makeblastdb.cwl Branch/Commit ID: aa64bf6a90e0780ab564de865dbb027df98c0a01