Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Filter differentially expressed genes from DESeq for Tag Density Profile Analyses Filters differentially expressed genes from DESeq for Tag Density Profile Analyses ================================================================================== Tool filters output from DESeq pipeline run for genes to create a file with regions of interest for Tag Density Profile Analyses.	https://github.com/datirium/workflows.git Path: workflows/filter-deseq-for-heatmap.cwl Branch/Commit ID: 60854b5d299df91e135e05d02f4be61f6a310fbc
	trick_revsort.cwl Reverse the lines in a document, then sort those lines.	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/trick_revsort.cwl Branch/Commit ID: aec33fcfa3459a90cbba8c88ebb991be94d21429
	wf_trim_partial_and_map_se_scatter.cwl	https://github.com/yeolab/eclip.git Path: cwl/wf_trim_partial_and_map_se_scatter.cwl Branch/Commit ID: 49a9bcda10de8f55fab2481f424eb9cdf2e5b256
	kmer_cache_store	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_cache_store.cwl Branch/Commit ID: 505b91e41741ccbcd5ebd2b6a09a3be604f9ece3
	scatter GATK HaplotypeCaller over intervals	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/gatk_haplotypecaller_iterator.cwl Branch/Commit ID: 889a077a20c0fdb01f4ed97aa4bc40f920c37a1a
	Subworkflow to allow calling different SV callers which require bam files as inputs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/single_sample_sv_callers.cwl Branch/Commit ID: 869b331cfeb9dbd5907498e3eccdebc7c28283e5
	Filter differentially expressed genes from DESeq for Tag Density Profile Analyses Filters differentially expressed genes from DESeq for Tag Density Profile Analyses ================================================================================== Tool filters output from DESeq pipeline run for genes to create a file with regions of interest for Tag Density Profile Analyses.	https://github.com/datirium/workflows.git Path: workflows/filter-deseq-for-heatmap.cwl Branch/Commit ID: 581156366f91861bd4dbb5bcb59f67d468b32af3
	dynresreq-workflow-inputdefault.cwl	https://github.com/common-workflow-language/cwl-v1.1.git Path: tests/dynresreq-workflow-inputdefault.cwl Branch/Commit ID: 0e37d46e793e72b7c16b5ec03e22cb3ce1f55ba3
	tt_kmer_compare_wnode Pairwise comparison	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_compare_wnode.cwl Branch/Commit ID: 546742b523ce12f6246a52c838a51920a08dad4b
	Varscan Workflow	https://github.com/genome/analysis-workflows.git Path: varscan/workflow.cwl Branch/Commit ID: 202b43b7449485a317c857d62ca7d39196764e65