Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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qa_check_subwf.cwl
This subworkflow will perform a QA check on the OxoG outputs. It will perform the QA check on a single tumour and it associated VCFs |
https://github.com/david4096/oxog-dockstore-tools.git
Path: qa_check_subwf.cwl Branch/Commit ID: develop |
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bulk_process.cwl
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https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git
Path: steps/bulk_process.cwl Branch/Commit ID: v1.0 |
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strelka workflow
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https://github.com/tmooney/cancer-genomics-workflow.git
Path: definitions/subworkflows/strelka_and_post_processing.cwl Branch/Commit ID: downsample_and_recall |
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idr.cwl
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https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/ChIP-Seq/idr.cwl Branch/Commit ID: master |
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Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/pvacseq.cwl Branch/Commit ID: 526df6d2937f92ecd00c3029748958faa692ac55 |
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pipeline_step4.cwl
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https://github.com/Gibbsdavidl/CWL_scatter_example.git
Path: pipeline_step4.cwl Branch/Commit ID: master |
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A workflow that aligns a fasta file and provides statistics on the SAM file
A workflow that aligns a fasta file and provides statistics on the SAM file |
https://github.com/dockstore/bcc2020-training.git
Path: cwl-training/exercise3/solution/align_and_metrics.cwl Branch/Commit ID: master |
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result_chunker.cwl
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https://github.com/kinow/pipeline-v5.git
Path: utils/result-file-chunker/result_chunker.cwl Branch/Commit ID: eosc-life-gos |
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pindel parallel workflow
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https://github.com/fgomez02/analysis-workflows.git
Path: definitions/subworkflows/pindel.cwl Branch/Commit ID: No_filters_detect_variants |
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collate_unique_SSU_headers.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/collate_unique_SSU_headers.cwl Branch/Commit ID: 6c856cd |
