Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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pdx-pl.cwl
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https://github.com/WEHI-ResearchComputing/pdx-genome.git
Path: src/pdx-pl.cwl Branch/Commit ID: master |
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SSU-from-tablehits.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/SSU-from-tablehits.cwl Branch/Commit ID: 0cd2d70 |
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Long-covid.cwl
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https://github.com/cwlviewer-test/Long-covid---aedea650-7a21-11ed-b9d2-e51f21933d80.git
Path: Long-covid---aede7f40-7a21-11ed-b9d2-e51f21933d80/Long-covid.cwl Branch/Commit ID: read-potential-cases-disc |
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pcawg_minibam_wf.cwl
This workflow will run OxoG, variantbam, and annotate. Run this as `dockstore --script --debug workflow launch --descriptor cwl --local-entry --entry ./oxog_varbam_annotate_wf.cwl --json oxog_varbam_annotat_wf.input.json ` |
https://github.com/icgc-tcga-pancancer/pcawg-minibam.git
Path: pcawg_minibam_wf.cwl Branch/Commit ID: master |
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chksum_seqval_wf_paired_fq.cwl
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https://github.com/cancerit/workflow-seq-import.git
Path: cwls/chksum_seqval_wf_paired_fq.cwl Branch/Commit ID: 0.4.0 |
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sum-wf-noET.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/sum-wf-noET.cwl Branch/Commit ID: main |
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Salmon quantification, FASTQ -> H5AD count matrix
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https://github.com/hubmapconsortium/salmon-rnaseq.git
Path: steps/salmon-quantification.cwl Branch/Commit ID: cee6caf |
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tRNA_selection.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/tRNA_selection.cwl Branch/Commit ID: 71d9c83 |
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minibam_sub_wf.cwl
This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow! |
https://github.com/ICGC-TCGA-PanCancer/pcawg-minibam.git
Path: minibam_sub_wf.cwl Branch/Commit ID: 1.0.0 |
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wf-loadContents.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/wf-loadContents.cwl Branch/Commit ID: main |
