Explore Workflows

https://github.com/curoverse/l7g.git

Path: cwl-version/tagset/l7g-tagset.cwl

Branch/Commit ID: cdfe9178ad4e481d2391cd2da74b82d66a61b0bb

https://github.com/YeoLab/eclip.git

Path: cwl/wf_clipseqcore_se_1barcode.cwl

Branch/Commit ID: c0fffc4979a92371dc0667a03e3d957bf7f77600

Workflow for handling reads containing one barcode. Returns the bam file containing read2 only. Notes: runs the following steps: - demultiplex - trimfirst_file2string - trimagain_file2string - b1_trim_and_map - view_r2 - index_r2_bam - make_bigwigs

https://github.com/YeoLab/eclip.git

Path: cwl/wf_clipseqcore_pe_1barcode.cwl

Branch/Commit ID: c0fffc4979a92371dc0667a03e3d957bf7f77600

https://github.com/uniqueg/rd_pipeline.git

Path: workflow.cwl

Branch/Commit ID: 48ca3daf0d0ab9512d5944aae7dfb50a8c41ee6c

Perform taxonomic identification tasks on an input genome

https://github.com/ncbi/pgap.git

Path: taxcheck.cwl

Branch/Commit ID: f5d70f3ad365a2c017fab1c9654c88bc1caf41aa

https://github.com/betisb/inputparser.git

Path: cwl/blast-scatter-flow-needs-work.cwl

Branch/Commit ID: 68747d69e04d126f7ea679f93a291a6de244a95f

https://github.com/ding-lab/TinDaisy.git

Path: cwl/workflows/tindaisy-merge.cwl

Branch/Commit ID: c81058f1f039446ab10488699675a42129040ecd

This workflow uses MEME suite for motif finding

https://github.com/ncbi/cwl-ngs-workflows-cbb.git

Path: workflows/ChIP-Seq/meme-motif.cwl

Branch/Commit ID: 793e327acc1d159ff601043ee88651fca62350dd

https://github.com/uc-cdis/genomel_pipelines.git

Path: genomel/cwl/workflows/harmonization/alignment_novoalign_multi_readgroup.cwl

Branch/Commit ID: 7504ead048c3acd64b9b92e44d044d558cb696f2

Reverse the lines in a document, then sort those lines.

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/revsort.cwl

Branch/Commit ID: 4c905b830371eee45188a53510ba0ee9113fd4c8