Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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record-in-secondaryFiles-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/record-in-secondaryFiles-wf.cwl Branch/Commit ID: main |
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bacterial_kmer
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https://github.com/ncbi/pgap.git
Path: bacterial_kmer/wf_bacterial_kmer.cwl Branch/Commit ID: master |
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RNASelector as a CWL workflow
https://doi.org/10.1007/s12275-011-1213-z |
https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/rna-selector.cwl Branch/Commit ID: a8abd0e |
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gatk-4.0.0.0-genomics-db-and-genotypegvcfs-per-interval-list.cwl
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https://github.com/wtsi-hgi/arvados-pipelines.git
Path: cwl/workflows/gatk-4.0.0.0-genomics-db-and-genotypegvcfs-per-interval-list.cwl Branch/Commit ID: master |
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foreign_screening.cwl
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https://github.com/ncbi/pgap.git
Path: vecscreen/foreign_screening.cwl Branch/Commit ID: test |
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qc_workflow.cwl
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https://github.com/andurill/ACCESS-Pipeline.git
Path: workflows/QC/qc_workflow.cwl Branch/Commit ID: 0.0.33_dmp |
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pcawg_minibam_wf.cwl
This workflow will run OxoG, variantbam, and annotate. Run this as `dockstore --script --debug workflow launch --descriptor cwl --local-entry --entry ./oxog_varbam_annotate_wf.cwl --json oxog_varbam_annotat_wf.input.json ` |
https://github.com/icgc-tcga-pancancer/pcawg-minibam.git
Path: pcawg_minibam_wf.cwl Branch/Commit ID: master |
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qc_workflow.cwl
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https://github.com/andurill/ACCESS-Pipeline.git
Path: workflows/QC/qc_workflow.cwl Branch/Commit ID: master |
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umi molecular alignment workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/molecular_alignment.cwl Branch/Commit ID: 5677d6df78453e62d2e78ab485f216feaef91681 |
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simple_two_step.cwl
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https://github.com/NCBI-Hackathons/BLAST-Pipelines-and-FAIR.git
Path: blast-pipelines/simple_two_step.cwl Branch/Commit ID: master |
