Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	exome alignment and germline variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/germline_detect_variants.cwl Branch/Commit ID: b465f0da2806ddb6df481409541d13288ccb40ec
	exomeseq-gatk4-03-organizedirectories.cwl	https://github.com/bespin-workflows/exomeseq-gatk4.git Path: subworkflows/exomeseq-gatk4-03-organizedirectories.cwl Branch/Commit ID: fd641e00364e257b2119ce5b26aedb01402dfcbe
	Unaligned to aligned BAM	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/align.cwl Branch/Commit ID: 5c4125344b1b9125ad04d7e768ecc99901570a7a
	unifiedgenotyper.cwl	https://github.com/uc-cdis/genomel_pipelines.git Path: genomel/cwl/workflows/variant_calling/unifiedgenotyper.cwl Branch/Commit ID: 0f8f97e6173085500b688ca8c601b1ce966dce33
	WGS QC workflow nonhuman	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/qc_wgs_nonhuman.cwl Branch/Commit ID: 35e6b3ef71b4a2a9caba1dbd5dc424a8809bcc0a
	Merge, annotate, and generate a TSV for SVs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/merge_svs.cwl Branch/Commit ID: 10870aefd20469e728969269ff3c54b3b8339a18
	annotator_sub_wf.cwl This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow!	https://github.com/baminou/OxoG-Dockstore-Tools.git Path: annotator_sub_wf.cwl Branch/Commit ID: ad42ab7a8c7e190d5f8615b52278346262256424
	cram_to_bam workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/cram_to_bam_and_index.cwl Branch/Commit ID: 509938802c5e42bb8084c6a5a26ab6425c60e69a
	scatterfail.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/scatterfail.cwl Branch/Commit ID: 814bd0405a7701efc7d63e8f0179df394c7766f7
	ConcordanceCheckerWorkflow.cwl	https://github.com/DataBiosphere/topmed-workflows.git Path: vcf-comparator/ConcordanceCheckerWorkflow.cwl Branch/Commit ID: de5e708a67fd326bc00c0ee280eec2a29b004a0f