Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	exome alignment with qc, no bqsr, no verify_bam_id	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/alignment_exome_mouse.cwl Branch/Commit ID: 3bb0693076adc1543079a6b136c74906ad546ac6
	test-workflow.cwl	https://github.com/pjotrp/CWL-workflows.git Path: Workflows/test-workflow.cwl Branch/Commit ID: c8e66c53a76ee62c541eb98cb2cfedeba6dd5b9a
	bam to trimmed fastqs and HISAT alignments	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_trimmed_fastq_and_hisat_alignments.cwl Branch/Commit ID: e8b7759826df40b8bb821b40b15aea960a4951c4
	format_rrnas_from_seq_entry	https://github.com/ncbi-gpipe/pgap.git Path: task_types/tt_format_rrnas_from_seq_entry.cwl Branch/Commit ID: 71e3a42eadc007b66ef4689086530dfc3123d32f
	Non-Coding Bacterial Genes	https://github.com/ncbi-gpipe/pgap.git Path: bacterial_noncoding/wf_bacterial_noncoding.cwl Branch/Commit ID: ba3e313e646f1dd3da3f5f93a1e6cb7f252be97b
	umi molecular alignment workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/molecular_alignment.cwl Branch/Commit ID: 67f56d3b9c70ad56019ed8aa8d50a128e02be43b
	WGS QC workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/qc_wgs.cwl Branch/Commit ID: 3bb0693076adc1543079a6b136c74906ad546ac6
	phase VCF	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/phase_vcf.cwl Branch/Commit ID: 0c4855bf23622828413ecb09dd30754691c28014
	04-quantification-se-revstranded.cwl RNA-seq 04 quantification	https://github.com/alexbarrera/GGR-cwl.git Path: v1.0/RNA-seq_pipeline/04-quantification-se-revstranded.cwl Branch/Commit ID: 4e568335133405d28f4b73ae11e7f51f2900dfa3
	Alignment without BQSR	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/sequence_to_bqsr_mouse.cwl Branch/Commit ID: 2ae0a374fab650757cdae4391c8cbd32f02edf97