Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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scatter-wf1.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/scatter-wf1.cwl Branch/Commit ID: fec7a10466a26e376b14181a88734983cfb1b8cb |
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03-map-se.cwl
ATAC-seq 03 mapping - reads: SE |
https://github.com/alexbarrera/GGR-cwl.git
Path: v1.0/ATAC-seq_pipeline/03-map-se.cwl Branch/Commit ID: 0c7a51100908034e82ac008ac206d94ff8b011cd |
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scatter-wf1.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/scatter-wf1.cwl Branch/Commit ID: fd6e054510e2bb65eed4069a3a88013d7ecbb99c |
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Add snv and indel bam-readcount files to a vcf
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/vcf_readcount_annotator.cwl Branch/Commit ID: f45b52a24c7b54a75368dcbab24b4eb2c5a9c75a |
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pindel parallel workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/pindel.cwl Branch/Commit ID: f45b52a24c7b54a75368dcbab24b4eb2c5a9c75a |
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fail-unconnected.cwl
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https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/fail-unconnected.cwl Branch/Commit ID: 1f501e38ff692a408e16b246ac7d64d32f0822c2 |
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fail-unconnected.cwl
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https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/fail-unconnected.cwl Branch/Commit ID: e67f19d8a713759d761ecad050966d1eb043b85c |
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03-map-pe-blacklist-removal.cwl
ATAC-seq 03 mapping - reads: PE - blacklist removal |
https://github.com/alexbarrera/GGR-cwl.git
Path: v1.0/ATAC-seq_pipeline/03-map-pe-blacklist-removal.cwl Branch/Commit ID: 0c7a51100908034e82ac008ac206d94ff8b011cd |
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contig LCA
create LCA consistant across input contigs contigs order of precedence - rRNA, single copy gene, LCA of genes |
https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/contig-lca.workflow.cwl Branch/Commit ID: 4e4d2e674bde612f98f2b0370445f8b2a47587df |
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Unaligned BAM to BQSR and VCF
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_bqsr.cwl Branch/Commit ID: 8cee1920920ed73384fb3ab74272da9c92a20cf2 |
