Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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RNASelector as a CWL workflow
https://doi.org/10.1007/s12275-011-1213-z |
https://github.com/proteinswebteam/ebi-metagenomics-cwl.git
Path: workflows/rna-selector.cwl Branch/Commit ID: 5dc7c5c |
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EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.
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https://github.com/farahzkhan/ebi-metagenomics-cwl.git
Path: workflows/emg-qc-paired.cwl Branch/Commit ID: master |
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taxcheck.cwl
Perform taxonomic identification tasks on an input genome |
https://github.com/ncbi/pgap.git
Path: taxcheck.cwl Branch/Commit ID: master |
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EMG pipeline v3.0 (paired end version)
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/emg-pipeline-v3-paired.cwl Branch/Commit ID: 135976d |
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preprocess.cwl
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https://github.com/Epigenomics-Screw/Screw.git
Path: cwl/preprocess.cwl Branch/Commit ID: dev |
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WF6101.cwl
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https://github.com/Marco-Salvi/dtc61.git
Path: WF6101.cwl Branch/Commit ID: remove-cycles |
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CODEX analysis pipeline using Cytokit
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https://github.com/hubmapconsortium/codex-pipeline.git
Path: pipeline.cwl Branch/Commit ID: a04e55b |
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WES GATK4 Preprocessing
Whole Exome Sequence analysis GATK4 Preprocessing |
https://github.com/Duke-GCB/bespin-cwl.git
Path: workflows/exomeseq-gatk4-preprocessing.cwl Branch/Commit ID: master |
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annotator_sub_wf.cwl
This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow! |
https://github.com/svonworl/OxoG-Dockstore-Tools.git
Path: annotator_sub_wf.cwl Branch/Commit ID: master |
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qiime2 rarefaction visualization
Alpha rarefaction plotting from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/ |
https://github.com/duke-gcb/bespin-cwl.git
Path: packed/qiime2-step3-alpha-analysis.cwl Branch/Commit ID: qiime2-workflow-paired Packed ID: qiime2-07-alpha-rarefaction.cwl |
