Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Immunotherapy Workflow	https://github.com/tmooney/cancer-genomics-workflow.git Path: definitions/pipelines/immuno.cwl Branch/Commit ID: downsample_and_recall
	vector_cleanup This workflow detect and remove vectors from a DNA fasta file	https://github.com/ncbi/cwl-ngs-workflows-cbb.git Path: workflows/Contamination/vector-cleanup.cwl Branch/Commit ID: master
	collate_unique_rRNA_headers.cwl	https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git Path: tools/collate_unique_rRNA_headers.cwl Branch/Commit ID: e1b0fce
	03-map-se.cwl ATAC-seq 03 mapping - reads: SE	https://github.com/alexbarrera/GGR-cwl.git Path: v1.0/ATAC-seq_pipeline/03-map-se.cwl Branch/Commit ID: v1.0
	FASTQ to BQSR	https://github.com/tmooney/cancer-genomics-workflow.git Path: definitions/subworkflows/fastq_to_bqsr.cwl Branch/Commit ID: downsample_and_recall
	wf_paleocar_web-app_data_flow_1.cwl	https://github.com/idaks/cwl_modeling.git Path: yw_cwl_modeling/yw_cwl_parser_old/Examples/main/wf_paleocar_web-app_data_flow_1.cwl Branch/Commit ID: master
	qa_check_subwf.cwl This subworkflow will perform a QA check on the OxoG outputs. It will perform the QA check on a single tumour and it associated VCFs	https://github.com/ICGC-TCGA-PanCancer/OxoG-Dockstore-Tools.git Path: qa_check_subwf.cwl Branch/Commit ID: master
	bulk_analysis.cwl	https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git Path: steps/bulk_analysis.cwl Branch/Commit ID: develop
	scRNA-seq pipeline using Salmon and Alevin	https://github.com/hubmapconsortium/salmon-rnaseq.git Path: pipeline.cwl Branch/Commit ID: 78ab832
	Functional analyis of sequences that match the 16S SSU	https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git Path: workflows/16S_taxonomic_analysis.cwl Branch/Commit ID: master

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