Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph exome alignment and germline variant detection, with optitype for HLA typing

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/germline_exome_hla_typing.cwl

Branch/Commit ID: 2e298960837739717ec2928a99c5d811183012e6
workflow graph bam2fasta.cwl

https://github.com/hpobio-lab/viral-analysis.git

Path: cwl/fastq2fasta/bam2fasta.cwl

Branch/Commit ID: 967e06fd4e5847e326a9b77ff3f0354aff69329a
workflow graph pangenome-generate.cwl

https://github.com/hpobio-lab/viral-analysis.git

Path: cwl/pangenome-generate/pangenome-generate.cwl

Branch/Commit ID: 1b1139d72e1bcc870424c87c7325e27ed79bc42c
workflow graph facets

https://github.com/mskcc/roslin-variant.git

Path: setup/cwl/facets.cwl

Branch/Commit ID: 425970cb18efb69b42edf26f92c07b7683a62576
workflow graph pangenome-generate.cwl

https://github.com/hpobio-lab/viral-analysis.git

Path: cwl/pangenome-generate/pangenome-generate.cwl

Branch/Commit ID: 24465ba219711f2828e633d25d9f183e0f0eaccd
workflow graph atm-plev-n2n.cwl

https://github.com/E3SM-Project/e3sm_to_cmip.git

Path: scripts/cwl_workflows/atm-unified/atm-plev-n2n.cwl

Branch/Commit ID: 662280529757f03a438fc0ad0da0d8ce6d15e25a
workflow graph Unaligned to aligned BAM

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/align.cwl

Branch/Commit ID: 00df82a529a58d362158110581e1daa28b4d7ecb
workflow graph Immunotherapy Workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/immuno.cwl

Branch/Commit ID: c23dc7f113ca0b0a3127a5d6c696e98d4799460c
workflow graph Trim and reformat reads (single and paired end version)

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/trim_and_reformat_reads.cwl

Branch/Commit ID: 25129f55226dee595ef941edc24d3c44414e0523
workflow graph collate_unique_SSU_headers.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/collate_unique_SSU_headers.cwl

Branch/Commit ID: 6c856cd2d7dd1c21016341feb942ada0fb5630cb