Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	umi per-lane alignment subworkflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/umi_alignment.cwl Branch/Commit ID: 1249b5d4e23d57ca5e3b8ad6d8e5f10ddb019f68
	1st-workflow.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/examples/1st-workflow.cwl Branch/Commit ID: 5c7799a145595323d0a8628be1fe0e24985e793a
	Varscan Workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/varscan_germline.cwl Branch/Commit ID: 0c4855bf23622828413ecb09dd30754691c28014
	pcr-bottleneck-coef.cwl ChIP-seq - map - PCR Bottleneck Coefficients	https://github.com/alexbarrera/GGR-cwl.git Path: v1.0/map/pcr-bottleneck-coef.cwl Branch/Commit ID: e019c548a0bc2f17b13365abd213259887069978
	Preprocess fastq Remove and trim low quality reads from fastq files. Return fasta files with reads passed and reads removed.	https://github.com/MG-RAST/pipeline.git Path: CWL/Workflows/preprocess-fastq.workflow.cwl Branch/Commit ID: d9cf22cd615542c94f7974e8bce4cf29b24d985f
	integrity.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/dnaseq/integrity.cwl Branch/Commit ID: 98af742f0b342b731766bc975b95ee7cc1f90fd2
	abundance abundace profiles from annotated files, for protein and/or rna	https://github.com/MG-RAST/pipeline.git Path: CWL/Workflows/abundance.workflow.cwl Branch/Commit ID: d9cf22cd615542c94f7974e8bce4cf29b24d985f
	Unaligned to aligned BAM	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/align.cwl Branch/Commit ID: 0c4855bf23622828413ecb09dd30754691c28014
	integrity.cwl	https://github.com/nci-gdc/gdc-dnaseq-cwl.git Path: workflows/mirnaseq/integrity.cwl Branch/Commit ID: 2f7c0e92e7b88b57b86602f11c595661c374008a
	integrity.cwl	https://github.com/nci-gdc/gdc-dnaseq-cwl.git Path: workflows/mirnaseq/integrity.cwl Branch/Commit ID: 0d3fdddeae5a398e476d91aa98766965866d8eae