Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
EMG assembly for paired end Illumina
|
https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git
Path: workflows/emg-assembly.cwl Branch/Commit ID: f993cad |
|
|
|
paramref_arguments_self.cwl
|
https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/paramref_arguments_self.cwl Branch/Commit ID: f1661438c07671b4738b1cad88c58b80541a76af |
|
|
|
vector_cleanup
This workflow detect and remove vectors from a DNA fasta file |
https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/Contamination/vector-cleanup.cwl Branch/Commit ID: master |
|
|
|
hello-workflow.cwl
|
https://github.com/inab/hello-workflows.git
Path: cwl/hello-workflow.cwl Branch/Commit ID: main |
|
|
|
baysorStaged.cwl
|
https://github.com/hubmapconsortium/spatial-transcriptomics-pipeline.git
Path: steps/baysorStaged.cwl Branch/Commit ID: master |
|
|
|
download_gtf.cwl
|
https://github.com/yyoshiaki/VIRTUS.git
Path: workflow/download_gtf.cwl Branch/Commit ID: master |
|
|
|
tmb_workflow.cwl
Workflow to run the TMB analysis on a batch of samples and merge the results back into a single data clinical file |
https://github.com/mskcc/pluto-cwl.git
Path: cwl/tmb_workflow.cwl Branch/Commit ID: master |
|
|
|
Whole Exome Sequencing
Whole Exome Sequence analysis using GATK best practices - Germline SNP & Indel Discovery |
https://github.com/Duke-GCB/bespin-cwl.git
Path: packed/exomeseq.cwl Branch/Commit ID: qiime2-workflow-paired Packed ID: main |
|
|
|
kallisto-pe.cwl
|
https://github.com/yyoshiaki/cwl_user_guide.git
Path: kallisto/kallisto-pe.cwl Branch/Commit ID: master |
|
|
|
ValidatePedestalEvents
Compare simulated and measured pedestal events (exposed to night-sky background light and with closed camera lid). |
https://github.com/gammasim/workflows.git
Path: workflows/ValidatePedestalEvents.cwl Branch/Commit ID: e0525b01ebee3ac1b4f0128a0002c6543a5918cf |
