Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph tt_blastn_wnode

https://github.com/ncbi/pgap.git

Path: task_types/tt_blastn_wnode.cwl

Branch/Commit ID: 61e3752f1f5e2ee498fa024c235226f8580be942
workflow graph STAR-RNA-Seq alignment and transcript/gene abundance workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/rnaseq_star_fusion.cwl

Branch/Commit ID: 889a077a20c0fdb01f4ed97aa4bc40f920c37a1a
workflow graph trim-rnaseq-pe.cwl

Runs RNA-Seq BioWardrobe basic analysis with pair-end data file.

https://github.com/datirium/workflows.git

Path: workflows/trim-rnaseq-pe.cwl

Branch/Commit ID: 94471ee6c01b7bc17102e45e56e7366c2a52acdf
workflow graph pindel parallel workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/pindel.cwl

Branch/Commit ID: 1249b5d4e23d57ca5e3b8ad6d8e5f10ddb019f68
workflow graph rnaseq-pe.cwl

RNA-Seq basic analysis workflow for paired-end experiment.

https://github.com/datirium/workflows.git

Path: workflows/rnaseq-pe.cwl

Branch/Commit ID: 94471ee6c01b7bc17102e45e56e7366c2a52acdf
workflow graph env-wf1.cwl

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/env-wf1.cwl

Branch/Commit ID: 622134ebc48980676b7e53fe39405c428920c03e
workflow graph 1st-workflow.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/1st-workflow.cwl

Branch/Commit ID: e59538cd9899a88d7e31e0f259bc56734f604383
workflow graph scatter-wf2.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/scatter-wf2.cwl

Branch/Commit ID: 50251ef931d108c09bed2d330d3d4fe9c562b1c3
workflow graph hisat2_samtools_htseq-dexseq.stringtie-prepDE-DESeq2.cwl

https://github.com/rawgene/cwl.git

Path: workflows/hisat2_samtools_htseq-dexseq.stringtie-prepDE-DESeq2.cwl

Branch/Commit ID: bbbbd9dd412a6abfee9bb0c9e9754cb8b5294b02
workflow graph phase VCF

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/phase_vcf.cwl

Branch/Commit ID: 889a077a20c0fdb01f4ed97aa4bc40f920c37a1a