Workflow: protein_extract
Fetched 2023-01-14 05:21:08 GMT
Verified with cwltool version 3.1.20221201130942
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This workflow is Open Source and may be reused according to the terms of:
https://raw.githubusercontent.com/ncbi/pgap/b560e3abadfb150a0013376d7a189df066ab56f9/LICENSE.md
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| input | File | ||
| olds2 | String (Optional) | ||
| oseqids | String (Optional) | ||
| nogenbank | Boolean | ||
| oproteins | String (Optional) |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| lds2_fix |
protein_extract.cwl#lds2_fix/10c3cabd-5b8a-47d7-83e0-cabe1280d7c2
(CommandLineTool)
|
||
| protein_extract |
protein_extract.cwl#protein_extract/44acea2d-1dce-4da0-bd9c-175eede1347e
(CommandLineTool)
|
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| lds2 | File | ||
| seqids | File | ||
| proteins | File |
Permalink:
https://w3id.org/cwl/view/git/b560e3abadfb150a0013376d7a189df066ab56f9/progs/protein_extract.cwl
