Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	running cellranger mkfastq and count	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/cellranger_mkfastq_and_count.cwl Branch/Commit ID: 4bc0a4577d626b65a4b44683e5a1ab2f7d7faf4c
	count-lines9-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/count-lines9-wf.cwl Branch/Commit ID: ec2cf2da6c31ffedf827a0fb213b5204e172f510
	gp_makeblastdb	https://github.com/ncbi/pgap.git Path: progs/gp_makeblastdb.cwl Branch/Commit ID: f6950321e5c9ee733ad68a273d2ad8e802a6b982
	rna annotation RNAs - predict, cluster, identify, annotate	https://github.com/MG-RAST/pipeline.git Path: CWL/Workflows/rna-annotation.workflow.cwl Branch/Commit ID: 6c5d0068bdb4f19a36a653c39964aefb9e5a7b1b
	04-quantification-se-unstranded.cwl RNA-seq 04 quantification	https://github.com/alexbarrera/GGR-cwl.git Path: v1.0/RNA-seq_pipeline/04-quantification-se-unstranded.cwl Branch/Commit ID: 7696e7eb27a9251fba53ef4ccacc84cc8f8b0685
	exome alignment with qc, no bqsr, no verify_bam_id	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/exome_alignment_mouse.cwl Branch/Commit ID: 441b85003fdc10cf4cbf333d89acb4d23b0fef32
	Run tRNAScan	https://github.com/ncbi/pgap.git Path: bacterial_trna/wf_trnascan.cwl Branch/Commit ID: f6950321e5c9ee733ad68a273d2ad8e802a6b982
	module-4	https://github.com/mskcc/roslin-variant.git Path: setup/cwl/module-4.cwl Branch/Commit ID: 425970cb18efb69b42edf26f92c07b7683a62576
	Filter Protein Seeds I; Find ProSplign Alignments I	https://github.com/ncbi/pgap.git Path: protein_alignment/wf_compart_filter_prosplign.cwl Branch/Commit ID: 7e3e1cb249e85285e27ef3ebd4104965f835241d
	Align reference proteins plane complete workflow	https://github.com/ncbi/pgap.git Path: protein_alignment/wf_protein_alignment.cwl Branch/Commit ID: f6950321e5c9ee733ad68a273d2ad8e802a6b982