Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
Run genomic CMsearch
|
https://github.com/ncbi/pgap.git
Path: bacterial_noncoding/wf_gcmsearch.cwl Branch/Commit ID: a34f47d1e37af51e387ecdfa5c3047f106c1146b |
|
|
|
WGS QC workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/qc_wgs.cwl Branch/Commit ID: b465f0da2806ddb6df481409541d13288ccb40ec |
|
|
|
collate_unique_SSU_headers.cwl
|
https://github.com/proteinswebteam/ebi-metagenomics-cwl.git
Path: tools/collate_unique_SSU_headers.cwl Branch/Commit ID: 823cdf7a6601a3799f6167f3566ae02590748f6b |
|
|
|
rRNA_selection.cwl
|
https://github.com/proteinswebteam/ebi-metagenomics-cwl.git
Path: tools/rRNA_selection.cwl Branch/Commit ID: 823cdf7a6601a3799f6167f3566ae02590748f6b |
|
|
|
tRNA_selection.cwl
|
https://github.com/proteinswebteam/ebi-metagenomics-cwl.git
Path: tools/tRNA_selection.cwl Branch/Commit ID: 823cdf7a6601a3799f6167f3566ae02590748f6b |
|
|
|
Raw sequence data to BQSR
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/sequence_to_bqsr.cwl Branch/Commit ID: 04d21c33a5f2950e86db285fa0a32a6659198d8a |
|
|
|
Run genomic CMsearch (Rfam rRNA)
|
https://github.com/ncbi/pgap.git
Path: bacterial_ncrna/wf_gcmsearch.cwl Branch/Commit ID: a34f47d1e37af51e387ecdfa5c3047f106c1146b |
|
|
|
filter-pcr-artifacts.cwl
DNase-seq - map - Filter PCR Artifacts |
https://github.com/alexbarrera/GGR-cwl.git
Path: v1.0/map/filter-pcr-artifacts.cwl Branch/Commit ID: 4636f2c1a8bcfceeb4b3596ee29e9c06311ed4a1 |
|
|
|
Bacterial Annotation, pass 4, blastp-based functional annotation (second pass)
|
https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass4.cwl Branch/Commit ID: a34f47d1e37af51e387ecdfa5c3047f106c1146b |
|
|
|
WGS QC workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/qc_wgs.cwl Branch/Commit ID: 04d21c33a5f2950e86db285fa0a32a6659198d8a |
