Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph fastqc-0-11-4-1.cwl

https://github.com/mr-c/4dn-dcic-pipelines-cwl.git

Path: cwl_awsem_v1/fastqc-0-11-4-1.cwl

Branch/Commit ID: dev2
workflow graph m2a_without_transfer_learning.cwl

https://github.com/chenlab-sj/M2A.git

Path: cwl/m2a_without_transfer_learning.cwl

Branch/Commit ID: master
workflow graph Identifies non-coding RNAs using Rfams covariance models

https://github.com/mscheremetjew/workflow-is-cwl.git

Path: workflows/cmsearch-multimodel-wf.cwl

Branch/Commit ID: assembly
workflow graph Compute average of average for core domain instances

Compute average structure for all averaged structures corresponding to core UniProt domain instances. First computes average per UniProt domain instance and then average all averaged structures.

https://gitlab.inria.fr/capsid.public_codes/CroMaSt.git

Path: Tools/core_avg_subwf.cwl

Branch/Commit ID: main
workflow graph kallisto_wf_se.cwl

https://github.com/pitagora-network/pitagora-cwl.git

Path: workflows/kallisto/single_end/kallisto_wf_se.cwl

Branch/Commit ID: master
workflow graph count-lines12-wf.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/count-lines12-wf.cwl

Branch/Commit ID: master
workflow graph LSU-from-tablehits.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/LSU-from-tablehits.cwl

Branch/Commit ID: 71d9c83
workflow graph ChIP-seq peak caller workflow MACS2 based

This workflow execute peak caller and QC for ChIP-seq using MACS2

 https://github.com/ncbi/cwl-ngs-workflows-cbb.git

Path: workflows/ChIP-Seq/peak-calling-MACS2-genome-size.cwl

Branch/Commit ID: master
workflow graph umi duplex alignment fastq workflow

https://github.com/fgomez02/analysis-workflows.git

Path: definitions/pipelines/umi_duplex_alignment.cwl

Branch/Commit ID: No_filters_detect_variants
workflow graph Functional analyis of sequences that match the 16S SSU

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/16S_taxonomic_analysis.cwl

Branch/Commit ID: 5dc7c5c