Explore Workflows
View already parsed workflows here or click here to add your own
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qiime2 create feature visual summaries
FeatureTable and FeatureData summaries from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/ |
https://github.com/Duke-GCB/bespin-cwl.git
Path: packed/qiime2-step2-dada2-paired.cwl Branch/Commit ID: qiime2-workflow-paired Packed ID: qiime2-04-features.cwl |
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ATACseq.cwl
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https://github.com/CompEpigen/ATACseq_workflows.git
Path: CWL/workflows/ATACseq.cwl Branch/Commit ID: master |
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minibam_sub_wf.cwl
This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow! |
https://github.com/svonworl/OxoG-Dockstore-Tools.git
Path: minibam_sub_wf.cwl Branch/Commit ID: develop |
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trick_revsort.cwl
Reverse the lines in a document, then sort those lines. |
https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/trick_revsort.cwl Branch/Commit ID: main |
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EMG assembly for paired end Illumina
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https://github.com/proteinswebteam/ebi-metagenomics-cwl.git
Path: workflows/emg-assembly.cwl Branch/Commit ID: 9c57dba |
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annotator_sub_wf.cwl
This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow! |
https://github.com/david4096/oxog-dockstore-tools.git
Path: annotator_sub_wf.cwl Branch/Commit ID: develop |
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l1b_workflow.cwl
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https://github.com/mliukis/sounder-sips-application.git
Path: cwl/l1b_workflow.cwl Branch/Commit ID: main |
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trimmed_fastq
Quality Control (raw data), Raw Data trimming and Quality Control (pre-processed) |
https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/cwl/abstract_operations/subworkflows/trimmed_fastq.cwl Branch/Commit ID: master |
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ST520115.cwl
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https://github.com/Marco-Salvi/cwl-ro-crate.git
Path: ST520115.cwl Branch/Commit ID: main |
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ST520102.cwl
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https://github.com/Marco-Salvi/cwl-ro-crate.git
Path: ST520102.cwl Branch/Commit ID: main |
