Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Create Genomic Collection for Bacterial Pipeline, ASN.1 input	https://github.com/ncbi/pgap.git Path: genomic_source/wf_genomic_source_asn.cwl Branch/Commit ID: 0bc1c33a2293e054ad00974971edc79c13252cc7
	mutect parallel workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/mutect.cwl Branch/Commit ID: 789267ce0e3fed674ea5212a562315218fcf1bfc
	Bacterial Annotation, pass 4, blastp-based functional annotation (second pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass4.cwl Branch/Commit ID: 0bc1c33a2293e054ad00974971edc79c13252cc7
	Bacterial Annotation, pass 3, structural annotation, functional annotation: ab initio GeneMark, by WP, by HMM (second pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass3.cwl Branch/Commit ID: 0bc1c33a2293e054ad00974971edc79c13252cc7
	spurious_annot	https://github.com/ncbi/pgap.git Path: spurious_annot/wf_spurious_annot_pass1.cwl Branch/Commit ID: 0bc1c33a2293e054ad00974971edc79c13252cc7
	gp_makeblastdb	https://github.com/ncbi/pgap.git Path: progs/gp_makeblastdb.cwl Branch/Commit ID: 0bc1c33a2293e054ad00974971edc79c13252cc7
	fp_filter workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/fp_filter.cwl Branch/Commit ID: 789267ce0e3fed674ea5212a562315218fcf1bfc
	Execute CRISPR	https://github.com/ncbi/pgap.git Path: bacterial_mobile_elem/wf_bacterial_mobile_elem.cwl Branch/Commit ID: 0bc1c33a2293e054ad00974971edc79c13252cc7
	Run genomic CMsearch (Rfam rRNA)	https://github.com/ncbi/pgap.git Path: bacterial_ncrna/wf_gcmsearch.cwl Branch/Commit ID: 0bc1c33a2293e054ad00974971edc79c13252cc7
	bgzip and index VCF	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bgzip_and_index.cwl Branch/Commit ID: 22fce2dbdada0c4135b6f0677f78535cf980cb07