Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph count-lines11-null-step-wf-noET.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/count-lines11-null-step-wf-noET.cwl

Branch/Commit ID: master
workflow graph bulk scRNA-seq pipeline using Salmon

https://github.com/hubmapconsortium/salmon-rnaseq.git

Path: bulk-pipeline.cwl

Branch/Commit ID: 536d6ed
workflow graph preprocess.cwl

https://github.com/Epigenomics-Screw/Screw.git

Path: cwl/preprocess.cwl

Branch/Commit ID: scatter
workflow graph wf_run_exemplary_wf.cwl

https://github.com/BAMresearch/NFDI4IngScientificWorkflowRequirements.git

Path: exemplary_workflow/cwl/wf_run_exemplary_wf.cwl

Branch/Commit ID: main
workflow graph vcf_concat.cwl

https://github.com/mskcc/Innovation-Pipeline.git

Path: workflows/subworkflows/vcf_concat.cwl

Branch/Commit ID: master
workflow graph taxcheck.cwl

Perform taxonomic identification tasks on an input genome

https://github.com/ncbi/pgap.git

Path: taxcheck.cwl

Branch/Commit ID: test
workflow graph sc_atac_seq_prep_process_init.cwl

https://github.com/hubmapconsortium/multiome-rna-atac-pipeline.git

Path: sc-atac-seq-pipeline/steps/sc_atac_seq_prep_process_init.cwl

Branch/Commit ID: a33bc8a
workflow graph main.cwl

https://github.com/smc-rna-challenge/beccyl-7238196.git

Path: main.cwl

Branch/Commit ID: master
workflow graph FASTQ Vector Removal

This workflow convert fastq to multiple fasta files

 https://github.com/ncbi/cwl-ngs-workflows-cbb.git

Path: workflows/File-formats/fastq-to-splitted-fasta.cwl

Branch/Commit ID: master
workflow graph module-1.cwl

https://github.com/mskcc/Innovation-Pipeline.git

Path: workflows/module-1.cwl

Branch/Commit ID: master