Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	step-valuefrom2-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/step-valuefrom2-wf.cwl Branch/Commit ID: 1e5ad10c6b0d1c5f531737d12ef64062a00baef2
	Bacterial Annotation, pass 4, blastp-based functional annotation (second pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass4.cwl Branch/Commit ID: 5331b0836aa7c451d759ef39dc2062000ac21a47
	list ZIP content by URL curl will download a HTTP/HTTPS resource or file from a given URL, following any redirections.	https://github.com/stain/ro-index-paper.git Path: code/data-gathering/workflows/zip-content-by-url.cwl Branch/Commit ID: 5f4b5aab2a9e0fa53eb3d49d62a52d47025a967d
	basename-fields-test.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/basename-fields-test.cwl Branch/Commit ID: a70a83fe14a100cd16e2402ec17b2904f5eeb17d
	bgzip and index VCF	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bgzip_and_index.cwl Branch/Commit ID: 3bebaf9b70331de9f4845e2223c55082f5a812fb
	spurious_annot	https://github.com/ncbi/pgap.git Path: spurious_annot/wf_spurious_annot_pass1.cwl Branch/Commit ID: 5331b0836aa7c451d759ef39dc2062000ac21a47
	sec-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/sec-wf.cwl Branch/Commit ID: 1e5ad10c6b0d1c5f531737d12ef64062a00baef2
	kmer_top_n_extract	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_top_n_extract.cwl Branch/Commit ID: 76a9637a06e2102645eae29aff10b6f7185892a5
	adapter for sequence_align_and_tag Some workflow engines won't stage files in our nested structure, so parse it out here	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/sequence_align_and_tag_adapter.cwl Branch/Commit ID: 2e298960837739717ec2928a99c5d811183012e6
	Bacterial Annotation, pass 3, structural annotation, functional annotation: ab initio GeneMark, by WP, by HMM (second pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass3.cwl Branch/Commit ID: 5331b0836aa7c451d759ef39dc2062000ac21a47